Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_017685.1 Length=14717 Score E Sequences producing significant alignments: (Bits) Value seq66067 80.6 2e-11 >seq66067 Length=1491 Score = 80.6 bits (88), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 9853 AAGGCTAAAGAAAGAGA-ATTAAAAATTGATGGCAGATTCTTCTCATTAATGTCATATGA 9911 |||| |||||| |||| |||||||| || || || ||||||||||| ||||| | | Sbjct 1054 AAGGGCAAAGAATGAGAGATTAAAAAG-GAGGGAAGGTTCTTCTCATTGATGTCTTGGAA 1112 Query 9912 TATGAGAGATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATT 9971 |||||| | || || || | || ||| || |||| | | | | |||||| ||||| || Sbjct 1113 AATGAGACAATACTTCGTGACCACCGAGCATATGATCAGAGAGTTCTATGTCCCATTGTT 1172 Query 9972 CAAAGGATTAACAATGGCTGATGACC 9997 || | | ||||||||||| |||| Sbjct 1173 TTCAGAAATGACAATGGCTGACGACC 1198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46864915089440