Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq36615 86.0 4e-13 >seq36615 Length=1239 Score = 86.0 bits (94), Expect = 4e-13 Identities = 243/364 (67%), Gaps = 17/364 (5%) Strand=Plus/Plus Query 6493 GCAAACCACATTGACTATGAGAAATGGAACAACCATCAGAGGAAACGGT--CAAATGAAC 6550 || ||||| ||||||| |||||||||||||| ||||| || | || ||||||| | Sbjct 266 GCCAACCATGTTGACTACGAGAAATGGAACAATCATCAAAG--AGTGGAAGCAAATGACC 323 Query 6551 CAATTTTTAAAGTCATGGGTCAATTCTTGGGGTTTCCCAACCTTATATCGAGG-ACTCAT 6609 | | || | |||| || | | || || | |||||| | | | | | |||| Sbjct 324 CTGTCTTCACCATCATTGGGAAGGTTTTTGG-TCTCCCAAATGTCTTTGCACGCACTCCC 382 Query 6610 GAATTCTTTGAGAAAAGTCTCATCTATTATAATGGAAGGCCTGATTTGATG-AAGGTGCA 6668 | |||||| | ||||||| | |||||| | | || ||| ||||| ||| || Sbjct 383 GCATTCTTCCAAGAAAGTCTTGTGTATTATGGTCCCCGACCAGATCTGATGGAAGTTG-- 440 Query 6669 AGATGGAAGACT---TGTGAACACAACGAAGCAATT-GGTTTGTTGGGAAGGACAGGCAG 6724 ||| ||| | |||| | |||| | | || ||| ||||||||||||||| | Sbjct 441 ---TGGGAGATTCAGTGTGCA-ACAAAGGCTCTTTTTGGTGTGTTGGGAAGGACAGCTTG 496 Query 6725 GCGGATTAGAGGGGTTAAGACAGAAGGGATGGAGCATCTTAAACTTATTGGTTATTCAAA 6784 | ||||| || || | ||||||||||| ||||| ||| | || | | ||| | | Sbjct 497 GTGGATTGGAAGGACTGAGACAGAAGGGTTGGAGTATCGTCAATCTCCTTGTTTTGCTTC 556 Query 6785 GGGAATCCAAGATTCGGAACACAGCAGTTAAAGTCCTTGCACAAGGTGATAATCAAGTAA 6844 | || |||||| ||||| ||| || ||| || |||||||| || |||||| | | Sbjct 557 GTGAGGCCAAGACCCGGAATACATTGGTCAAAACACTCGCACAAGGAGACAATCAACTCA 616 Query 6845 TATG 6848 |||| Sbjct 617 TATG 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35285028810048