Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_024113.1 Length=3114 Score E Sequences producing significant alignments: (Bits) Value seq142294 1465 0.0 seq10324 967 0.0 >seq142294 Length=2602 Score = 1465 bits (1624), Expect = 0.0 Identities = 1718/2320 (74%), Gaps = 34/2320 (1%) Strand=Plus/Minus Query 185 CTACAAAGAACATGCAACCTTCATCTACACTCCAGGAGGAAAACTGGAGGAGTATAAAGG 244 |||| ||||||| | || | ||||||||| || | ||| || |||||| |||||||| Sbjct 2379 CTACCAAGAACACACCACGTACATCTACACACCGGAAGGTAAGATGGAGGTTTATAAAGG 2320 Query 245 AGACGGACTCAAGGTATGGAAGTTGGAGCCCACATTGGGGGATCCGACCGAATTGGGTAG 304 ||| ||||| || || ||||| |||||||| ||||||| || || ||||| || || Sbjct 2319 AGATGGACTTAAAGTCTGGAAACTGGAGCCCTCATTGGGCGACCCACAAGAATTAGGCAG 2260 Query 305 GCAGGCTAAGAAAGAGATGAATGCTATGACCTATGAAGAATTCGATAGAATGAAGTTCAG 364 |||| || | || ||||| || ||||| | || || || ||||| ||||||| ||| Sbjct 2259 AAAGGCAAAAACGGAAATGAACGCCATGACGCACGAGGAGTTTGATAGGATGAAGTACAG 2200 Query 365 GGGAGTGGTGGCCGAAGCGTACGCAGCAGACAAACCATCAAAAGGCTATGACAAACTCAG 424 ||||| ||||| || | ||| || | || |||||||| || || |||||||| | | Sbjct 2199 AGGAGTCGTGGCAGAGGTGTATGCCGGGGATAAACCATCGAAGGGGTATGACAAGTTGCG 2140 Query 425 GACACTGCTAGACATAATGGATAGACCCAAGCTGGGAACAACGGTTGATCTTTGTGCGGG 484 ||| | ||| | ||||| ||||| || ||||| || ||||| || || || || Sbjct 2139 AGTACTCTTGGACTTGATGGACAGACCGAAACTGGGCCTGACAGTTGACCTATGCGCCGG 2080 Query 485 CCGAGGAGGCTGGAGCCAGCTAGTCAGAGAGCTAGAGGGACCAGGTGACATCACCGCTGT 544 |||||| || |||||| | | |||| || ||||||||||| |||| | || || || Sbjct 2079 CCGAGGTGGGTGGAGCGAATTGGTCAAGGATCTAGAGGGACCCGGTGGTGTTACAGCAGT 2020 Query 545 CTCCCTATGGGAGAGAGGCAGAGAGGAATGGATGGCCGACCCTGCAATAAGAAGGATCAA 604 ||||| ||||| ||||| | ||||| |||||||||||||| || ||| |||||| | Sbjct 2019 GTCCCTTTGGGAAAGAGGAAAGGAGGAGTGGATGGCCGACCCGGCCATACACAGGATCCA 1960 Query 605 TGCCAATGTAAAGAACGTCAAGCCCTGGCGTGTAGACACACTGCTATTCGATgggggggA 664 || ||||| || || | |||||||||| |||||||| || || || || ||||| || Sbjct 1959 CGCAAATGTGAAACACCTAAAGCCCTGGCAGGTAGACACTCTCCTCTTTGACGGGGGAGA 1900 Query 665 GACCTTCAAAAGGGACCAAAACATCATGAAGGAAGAGAGCTACAACGACGCCCTGCTGGA 724 |||||||||| || |||||||| | |||||| |||| ||||||| || | |||||||| Sbjct 1899 AGCCTTCAAAAGAGATCAAAACATAAAGAAGGAGGAGAACTACAACAACTCACTGCTGGA 1840 Query 725 TGCTGTGGACGCATGGATGATGCAGGCAACACCTCCCACAAACTTCGTGGTAAAGATACA 784 || || ||||| |||||||||||| | || || | ||||||| | | ||||| || Sbjct 1839 CGCCGTCGACGCTTGGATGATGCAGCCCGTTCCGCCAAAAAACTTCATCATCAAGATCCA 1780 Query 785 GGTTCCCTATACACAAAAAGCGATGAGACTCATAGAAAAGTGGCAAGTGAAGACCAAGAA 844 || |||||||||||||| || || || || || || |||||||| |||||||| || || Sbjct 1779 AGTGCCCTATACACAAAAGGCCATAAGTCTGATGGAGAAGTGGCAGGTGAAGACAAACAA 1720 Query 845 GGGAAGATTGGTAAGGCTGGCAGGGGACAGGCTGTCCAACACCGTGATGTACTTCATATC 904 ||| | | || ||| |||| ||||||||| |||||||||| || ||||||||||| || Sbjct 1719 GGGCCGCCTAGTGAGGTTGGCTGGGGACAGGTTGTCCAACACGGTCATGTACTTCATCTC 1660 Query 905 GGATAGGCTGGAGACGCAGATTCGGGGAAGGATAGCCAGTTTCCTCAGAGAGCTCCGGGA 964 ||||||||||||||| |||||||| ||||| || ||| |||||||||||| | ||| Sbjct 1659 GGATAGGCTGGAGACTCAGATTCGAGGAAGAATCACCACCTTCCTCAGAGAGTTGATGGA 1600 Query 965 GCGAAGAGTGGACAGATCCTTGACGTCTGACCCGGCCCTGCAATACGAACGCATAGTACC 1024 | |||| ||||| || | || ||||||||| |||||| ||||| | | | || Sbjct 1599 GAGAAGGAAAGACAGGTCGCTCACATCTGACCCGTCCCTGCGCTACGAGAGAGTGGAGCC 1540 Query 1025 AGAGTGGACAGCAGAGGCTGTGATTGAGGGCTGTGCCCCACTCACACCGCTTAACATGAC 1084 ||||||| | ||||| ||| |||||||| || || || || || || |||| Sbjct 1539 GCAGTGGACGGATGAGGCAAAGATAGAGGGCTGCAAGCCCCTGACGCCCCTGAATATGAG 1480 Query 1085 CAGATCTATAGCAGAGATGCATATGGAACACCCACCCTTGGGGATAACCAGATTCTTCAA 1144 ||| || | |||||| | ||||| | || |||| || || |||||||| Sbjct 1479 CAGGTCGGTTAATGAGATGAAGATGGACAGGGCTCCGCTGGGCATTACACACTTCTTCAA 1420 Query 1145 AGAGCTCGGTTACAAGATCGCA--AAAAAGAAGGGATCAGAAGGCACGCGAAAAAACAGG 1202 ||| | || ||| | | ||| ||||||| || ||||| || || |||| |||||| Sbjct 1419 GGAGGTGGGGTACCGGGTGGCAGTAAAAAGA--GGCTCAGAGGGGACACGAAGGAACAGG 1362 Query 1203 TTCGTGGGCCAGCTCATAGAGCCCCTAAGACGGGTGTTAGAACGACACCACCTCTTCGGG 1262 || |||| | || ||||| || |||| | ||| |||| |||||||| | ||||| Sbjct 1361 TTTGTGGCCACCCTGATAGATCCACTAAAGAGAGTGCTAGAGAGACACCACTTGTTCGGA 1302 Query 1263 GCATGGCAACTCACCTCAACGACACCTCGAGCCGTGTTCAATATCTTCAGAAGCAAAGTG 1322 || |||||| | || || |||||||| | || || ||||| |||||||||||||| || Sbjct 1301 GCCTGGCAATTAACATCGACGACACCCAGGGCAGTCTTCAACATCTTCAGAAGCAAGGTT 1242 Query 1323 GACAGGGCCCCTGTGGAGCT------CCACT--------------------CGCACTATC 1356 |||| ||| || |||||| ||||| || ||| | Sbjct 1241 GACAAGGCTCCCAGGGAGCTGCACGACCACTACCCGGGCCTGAGAGACGTACGAGCTACC 1182 Query 1357 CAGGACTGAAGAAAATGTACGACATTCTCGCCAACCTCTGGTTGGAGAGGCACGGAAAGA 1416 | || |||||||| ||||||||||| || || |||||||| | || ||| || || Sbjct 1181 CGGGCCTGAAGAAGATGTACGACATGCTGGCAGACCTCTGGCTCGAAAGGGTAGGCAAAC 1122 Query 1417 TGAAGCGACTAACCGAGGATGAAATGGCCTCGGCGATAAATAGGAGAGGTGCCATGGGTT 1476 ||||| | || || ||||| |||||||| |||| ||||| | || || || ||||| | Sbjct 1121 TGAAGAGGCTGACAGAGGAAGAAATGGCTGCGGCCATAAACCGCAGGGGAGCTATGGGAT 1062 Query 1477 ACCAGATGGACAACAGGAACTACGGAGACCTCGGGAGTTACTGGGACTCAGGGGACTGGA 1536 |||| ||||| ||||| || ||||| || || |||||||| || || |||| Sbjct 1061 ACCAAATGGAGAACAGAGGTCACTCTGACCTGGGCTCCTATTGGGACTCTGGAGAGTGGA 1002 Query 1537 GACAAGACGTCAACACGTTCAAG-AGGGCTCTGCTCAGCGGAACACCGACTCACGCTGTT 1595 |||| ||||| ||||| |||||| || || ||||| || || || || || || || Sbjct 1001 GACAGGACGTGAACACTTTCAAGCAGTGC-CTGCTGGCTGGGACTCCCACCCATGCCGTG 943 Query 1596 TACAACACCACTGCAAAGAAGGAAAAAACAAAGAATCTAACCAGGCAGGTGAACAAAGGA 1655 || |||||||| |||||||| ||||| |||||||| || || |||||||||||||||||| Sbjct 942 TATAACACCACGGCAAAGAAAGAAAAGACAAAGAACCTCACAAGGCAGGTGAACAAAGGA 883 Query 1656 AGCCGCATAATCCAGTACTTGCCTGCGGACGCCCGGCTCTATGAGCTGAAAGTGCTGGGC 1715 ||| | || ||||| || | || |||||||| || ||||| ||||| || ||||||||| Sbjct 882 AGCAGAATCATCCAATATCTCCCGGCGGACGCGCGCCTCTACGAGCTAAAGGTGCTGGGC 823 Query 1716 GGGTTGCACAAGTACTTGGAGAAGAGCGGGTGGAGCGTGGCAGGACAGGGCTTGTACAAG 1775 || ||||||||||| ||||| | ||| ||||| || ||||||||||| ||||||||| Sbjct 822 GGCCTGCACAAGTACCTGGAGGCGTGCGACTGGAGTGTCGCAGGACAGGGATTGTACAAG 763 Query 1776 TATGGAGATCGAGTAAAGAAGTCAATGGACGCTACCGGCGCCGCCATATCGGAAGACGTG 1835 || |||||| | || || ||| | ||| ||||| || ||||||||| | || |||||| Sbjct 762 TACGGAGATAGGGTTAACAAGGCTATGAGGGCTACAGGAGCCGCCATAGCTGAGGACGTG 703 Query 1836 GCGGGTTGGGACACGAAGATCTCGAAAGGATTACTCACCCTGGAGTCCCACATGTTCACT 1895 || || |||||||| ||||| ||||| ||| | || ||||||||| | || |||||||| Sbjct 702 GCAGGCTGGGACACCAAGATTTCGAAGGGACTCCTTACCCTGGAGGCACATATGTTCACG 643 Query 1896 AAACTAGCGGAGGATGAAGAAATGGCGCGGGAGATCCACCACCTCTACCGACTCTACGCA 1955 | || |||||||| | || |||| | |||||||||| ||||||||||||| |||||| Sbjct 642 AGGCTGGCGGAGGACAAGGAGATGGAGAAGGAGATCCACAACCTCTACCGACTGTACGCA 583 Query 1956 GACCCACACATGGTGGTTCAGAGGGAGATTGAGGGTGAAGTTCACGACGTACTCCTTAGG 2015 | || |||||||||| ||| ||||||| || || || || || ||||| || | || Sbjct 582 AATCCCTACATGGTGGTGCAGCGGGAGATAGAAGGAGAGGTGCATGACGTCCTGTTGAGA 523 Query 2016 GGGAGGGGGCAGGTCTCTTCCGGGAGGCAGCCCACCTATGCGGCCAACACCATTACCAAT 2075 || |||| ||||| || ||||| |||||||| ||||||||||| |||||||| || || Sbjct 522 GGACGGGGTCAGGTGTCGTCCGGCAGGCAGCCGACCTATGCGGCTAACACCATAACAAAC 463 Query 2076 TTCATAACGACAACATATGGAATGGCTGTTACCCTTGGCATACCTGAGGCCGATTGGCCC 2135 ||||| || ||| || ||| |||| || |||| |||||||| ||| || ||||| Sbjct 462 TTCATCACCACAGTGTACGGACTGGCCGTATCCCTGGGCATACCCGAGAGGGAGTGGCCG 403 Query 2136 CGATTGGTAAGGGACCTTACTGATGAGAGA-GGCAACAGGCGTCTCCTGGTCTCGGGGGA 2194 | || | ||||||| || || | ||| || ||||| || | ||||| ||||| || Sbjct 402 AGTCTGATCCGGGACCTGACGGACG-GAGCTGGGAACAGACGCATGCTGGTGTCGGGAGA 344 Query 2195 CGATAAGGTTCTTTTCTTGAGAGGAGATGAGGCTAGGGTCTACGCCTCATCGGCCTACCG 2254 ||||||||| || ||| | | |||||| |||||| || || || | ||||| || Sbjct 343 CGATAAGGTCCTCTTCCTAAAAGGAGAGGAGGCTCGGAAGTATGCAGGAAAGGCCTTCCT 284 Query 2255 GATAGGGAATGACATGGGATTGGTCAGAAAGGATATGGCCCTGGAGCAGGAATCTGAGAT 2314 ||| || || |||||||| |||||| | ||| | |||| |||||||||||||| ||||| Sbjct 283 GATCGGTAACGACATGGGCTTGGTCCGGAAGAACATGGGGCTGGAGCAGGAATCGGAGAT 224 Query 2315 TATAGTGGACGTGAAGGAAATATCCTTCTGCTCCCATAGGTACTGGCCGGTGAAGTACGG 2374 ||| |||||||| ||||| ||||||||||||| ||||||||| ||||||||||| Sbjct 223 CATAACTGACGTGAAAGAAATCAGCTTCTGCTCCCATCAGTACTGGCCTGTGAAGTACGG 164 Query 2375 CAATGAGACCCACTACATGCCAGTCAGGGACGTGGGAGAGATCTTCGCCAAGGCCACCAT 2434 | || ||||||||||| ||||| || || || ||||| | || ||||||| ||| Sbjct 163 TGAGGAAGTGCACTACATGCCGGTCAGAGATGTAGGTGAGATAGTGGCAAAGGCCAGCAT 104 Query 2435 GGCCTTGGGCGTCTACAAGGATGATATGACTCAGGAGGCT 2474 ||| ||||| || |||| ||| |||| || ||||||||| Sbjct 103 GGCGTTGGGTGTGTACAGGGACGATACCACGCAGGAGGCT 64 >seq10324 Length=1629 Score = 967 bits (1072), Expect = 0.0 Identities = 1075/1426 (75%), Gaps = 6/1426 (0%) Strand=Plus/Minus Query 1352 CTATCCAGGACTGAAGAAAATGTACGACATTCTCGCCAACCTCTGGTTGGAGAGGCACGG 1411 ||| || || |||||||| ||||||||||| | || |||||||| | | ||| || Sbjct 1629 CTACCCGGGCCTGAAGAAGATGTACGACATGTTGGCAGACCTCTGGCTCGTAAGGGTAGG 1570 Query 1412 AAAGATGAAGCGACTAACCGAGGATGAAATGGCCTCGGCGATAAATAGGAGAGGTGCCAT 1471 || | ||| | ||||| ||||| |||||||| |||| ||||| | || || ||||| Sbjct 1569 CAAACTAAAGAGGCTAACAGAGGAAGAAATGGCTGCGGCCATAAACCGCAGGGGAGCCAT 1510 Query 1472 GGGTTACCAGATGGACAACAGGAACTACGGAGACCTCGGGAGTTACTGGGACTCAGGGGA 1531 ||| ||||| ||||| ||||| || ||||| || ||||||||||| || || Sbjct 1509 GGGATACCAAATGGAAAACAGAGGTCACTCTGACCTGGGCTCCTACTGGGACTCTGGAGA 1450 Query 1532 CTGGAGACAAGACGTCAACACGTTCAAG-AGGGCTCTGCTCAGCGGAACACCGACTCACG 1590 |||||||| ||||| ||||| |||||| || || ||||| ||||| || || |||| Sbjct 1449 GTGGAGACAGGACGTGAACACCTTCAAGCAGTGC-CTGCTGGCTGGAACTCCCACCCACG 1391 Query 1591 CTGTTTACAACACCACTGCAAAGAAGGAAAAAACAAAGAATCTAACCAGGCAGGTGAACA 1650 | || ||||||||||| |||||||| ||||| |||||||| || || ||||||||||| | Sbjct 1390 CCGTGTACAACACCACGGCAAAGAAAGAAAAGACAAAGAACCTCACAAGGCAGGTGAATA 1331 Query 1651 AAGGAAGCCGCATAATCCAGTACTTGCCTGCGGACGCCCGGCTCTATGAGCTGAAAGTGC 1710 |||||||| | || |||||||| | || |||||||| || ||||| ||||| || |||| Sbjct 1330 AAGGAAGCAGAATTATCCAGTATCTTCCAGCGGACGCGCGTCTCTACGAGCTAAAGGTGC 1271 Query 1711 TGGGCGGGTTGCACAAGTACTTGGAGAAGAGCGGGTGGAGCGTGGCAGGACAGGGCTTGT 1770 |||| || ||||||||||| ||||| | | | ||||| || ||||||||||| ||| Sbjct 1270 TGGGAGGCCTGCACAAGTACCTGGAGGCGTGTGACTGGAGTGTCGCAGGACAGGGACTGT 1211 Query 1771 ACAAGTATGGAGATCGAGTAAAGAAGTCAATGGACGCTACCGGCGCCGCCATATCGGAAG 1830 |||||||||||||| | || || ||| | ||| || || || ||||||||| | || | Sbjct 1210 ACAAGTATGGAGATAGGGTTAACAAGGCCATGAGGGCCACAGGAGCCGCCATAGCCGAGG 1151 Query 1831 ACGTGGCGGGTTGGGACACGAAGATCTCGAAAGGATTACTCACCCTGGAGTCCCACATGT 1890 | ||||| || |||||||| ||||||||||| ||| | |||||||||||| | ||||||| Sbjct 1150 ATGTGGCAGGCTGGGACACCAAGATCTCGAAGGGACTCCTCACCCTGGAGGCACACATGT 1091 Query 1891 TCACTAAACTAGCGGAGGATGAAGAAATGGCGCGGGAGATCCACCACCTCTACCGACTCT 1950 |||| | || |||||||| | || |||| | ||| |||||| ||||||| ||||| | Sbjct 1090 TCACGAGGCTGGCGGAGGACAAGGAGATGGAGAAGGAAATCCACAACCTCTATCGACTGT 1031 Query 1951 ACGCAGACCCACACATGGTGGTTCAGAGGGAGATTGAGGGTGAAGTTCACGACGTACTCC 2010 ||||| | || |||||||||| ||| | ||||| || || || || ||||| || || Sbjct 1030 ACGCAAATCCCTACATGGTGGTGCAGCGAGAGATAGAAGGAGAGGTGCACGATGTCCTGT 971 Query 2011 TTAGGGGGAGGGGGCAGGTCTCTTCCGGGAGGCAGCCCACCTATGCGGCCAACACCATTA 2070 | || || |||| ||||| || ||||| |||||||| |||||||||||||||||||| | Sbjct 970 TGAGAGGACGGGGACAGGTGTCGTCCGGCAGGCAGCCGACCTATGCGGCCAACACCATAA 911 Query 2071 CCAATTTCATAACGACAACATATGGAATGGCTGTTACCCTTGGCATACCTGAGGCCGATT 2130 | || ||||| || ||| || ||| |||| || |||| | |||||| ||| || | Sbjct 910 CAAACTTCATCACCACAGTGTACGGACTGGCCGTGTCCCTGGACATACCCGAGAAGGAGT 851 Query 2131 GGCCCCGAT-TGGTAAGGGACCTTACTGATGAGAGA-GGCAACAGGCGTCTCCTGGTCTC 2188 |||| ||| || | ||||||| || || | ||| || | ||| || | ||||| || Sbjct 850 GGCCA-GATCTGATCCGGGACCTGACGGACG-GAGCCGGGAGCAGACGCATGCTGGTGTC 793 Query 2189 GGGGGACGATAAGGTTCTTTTCTTGAGAGGAGATGAGGCTAGGGTCTACGCCTCATCGGC 2248 ||| ||||||||||| || ||| ||| |||||| |||||| | || || | ||| Sbjct 792 GGGCGACGATAAGGTCCTCTTCCTGAAAGGAGAGGAGGCTCGAAAGTATGCAGGAAAGGC 733 Query 2249 CTACCGGATAGGGAATGACATGGGATTGGTCAGAAAGGATATGGCCCTGGAGCAGGAATC 2308 || || ||| || || |||||||| |||||| | ||| | |||| |||||||| ||||| Sbjct 732 CTTCCTGATTGGTAACGACATGGGCTTGGTCCGGAAGAACATGGGGCTGGAGCAAGAATC 673 Query 2309 TGAGATTATAGTGGACGTGAAGGAAATATCCTTCTGCTCCCATAGGTACTGGCCGGTGAA 2368 ||||| ||| ||||||| ||||| ||||||||||||| ||||||||| ||||| Sbjct 672 GGAGATCATAACTGACGTGAGAGAAATCAGCTTCTGCTCCCATCAGTACTGGCCTGTGAA 613 Query 2369 GTACGGCAATGAGACCCACTACATGCCAGTCAGGGACGTGGGAGAGATCTTCGCCAAGGC 2428 |||||| | || ||||||||||| |||||||| || || ||||| | || ||||| Sbjct 612 GTACGGTGAGGAAGTGCACTACATGCCGGTCAGGGATGTAGGTGAGATAATGGCAAAGGC 553 Query 2429 CACCATGGCCTTGGGCGTCTACAAGGATGATATGACTCAGGAGGCTTGGGCTAGAGTGCA 2488 | |||||| ||||| || || | || || | || |||||||| ||||| |||||||| Sbjct 552 TAGCATGGCGTTGGGTGTGTATAGAGACGACACCACGCAGGAGGCATGGGCAAGAGTGCA 493 Query 2489 AGGCCTGAATATGCTGGTAAACTACCACCACATTCCAGAATGCAGAATGCTGGCTCTTGC 2548 ||| | || |||||| |||||||||||||||| || || || || ||| |||| || || Sbjct 492 GGGCTTCAACATGCTGATAAACTACCACCACATACCGGAGTGTAGGATGTTGGCACTCGC 433 Query 2549 CATCCTCTCGGTAACACGGATTGGCCTAAACCTAAGGGGGATCACCAAGGGCTGGATGAT 2608 ||||| |||| ||| || |||| || ||||| | ||| ||| | || ||||||||||| Sbjct 432 AATCCTGTCGGCCACAAGGGTTGGACTGAACCTCAAGGGCATCGCAAAAGGCTGGATGAT 373 Query 2609 GAGCACCGAGTGGCTTAGAGACGACCTAGCACCAGATACTATCCACGCTCTCATCACCGA 2668 ||| || || ||||| ||||||| || | ||| || || |||||||| || | || || Sbjct 372 GAGTACTGAATGGCTACGAGACGATCTGGGACCGGACACCATCCACGCCCTGGTAACAGA 313 Query 2669 AGGGAGAACCTCGGGATGGGACCAATTAGGTTACGTGGATTTTAAGGACAGGAAAGGCAT 2728 ||||| ||| ||||||| ||| | || |||||||| | | |||||||| ||| | Sbjct 312 TGGGAGGACCCAGGGATGGAGGCAACTGGGGTACGTGGACTACAGTGACAGGAAGGGCCT 253 Query 2729 CCTACTACGACCCGATACTAGCTACAAGAATTGGAGGAGAGACCTC 2774 || || || || | ||||||||| ||||| || ||||| Sbjct 252 ACTGCTCACTCCGGACAAACACTACAAGAACTGGAGAAGGAACCTC 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9830760333260