Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq186615 82.4 7e-12 >seq186615 Length=1208 Score = 82.4 bits (90), Expect = 7e-12 Identities = 167/248 (67%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 10241 TACTGAATACCTGATCAAGAAATATTTTGTACCCTTATTTGAAGGTCTAACAATGGCTGA 10300 ||| ||| |||| | ||| ||| | ||||||| |||||| |||||| || ||||| || Sbjct 75 TACGGAACACCTTCTGAAGCAATTCTATGTACCCCTATTTGGAGGTCTCACCATGGCAGA 134 Query 10301 TGATTTGAATACAGTAATTAAGAAGATGTTGGATGTCTCAAGCGGCCAGGGAACCAGAGA 10360 || || | | ||| | || | | ||||||| ||| || || ||| | || Sbjct 135 CGACTTAACCAAAGTCACAAAAAGGCTGTTGGACAATTCATTGGGACAAGGACAAAACGA 194 Query 10361 ATATGATTATATAACTATTGCAAACAACATCGATTATGAAAAATGGAATAATTATCAAAG 10420 || | | | | || || || ||| ||| |||||||||||||||||| || | |||| Sbjct 195 TTACCAATCTGTTACCATCGCCAACCACAACGATTATGAAAAATGGAACAACCACCAAAA 254 Query 10421 GATAGAGTCTAACGGTCCAGTATTTACTGTCATGGGAAAATTTTTGGGGCTACCTAATCT 10480 ||| | || || || || ||||| |||||| ||| ||||| | || || | Sbjct 255 AGGAGACGCCGACAACCCTGTGTTCACTGTGATGGGACGATTCTTGGGTTTGCCAAACTT 314 Query 10481 CTTTACAA 10488 ||||||| Sbjct 315 GTTTACAA 322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47844991992196