Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_025378.1 Length=11202 Score E Sequences producing significant alignments: (Bits) Value seq36615 91.5 1e-14 seq66067 87.8 1e-13 >seq36615 Length=1239 Score = 91.5 bits (100), Expect = 1e-14 Identities = 347/541 (64%), Gaps = 3/541 (1%) Strand=Plus/Plus Query 6395 ATGTCTTGGAAATTGAGAGAATACTTCGTCATAACCGAGCACCTAATTAAGACTCACTTT 6454 ||||| |||| ||||| | ||||| || | ||| | ||| | || ||| | | Sbjct 95 ATGTCATGGAGGATGAGACAGTACTTTGTTACAACAAAACACTTCATCAAGGAGCTTTAC 154 Query 6455 GTCCCTCTGTTCCACGGACTTACGATGGCAGATGATCTCACATCAGTGATCAAGAAGATG 6514 || || || ||| || | || ||||| |||||||||||| ||||| |||||| | Sbjct 155 GTTCCCCTATTCTCAGGGTTGACAATGGCCGATGATCTCACAAAAGTGACCAAGAAACTC 214 Query 6515 ATGGACAGTTCCTCGGGGCAGGGGTTGACAGATTACTCAGCTGTATGCATAGCCAATCAT 6574 | |||| || ||||| | |||||| | | | ||||||| ||| Sbjct 215 CTCGACAACTCGATCAACCAGGGCCAGGTTGATTACCGTTCCATTTCTCTAGCCAACCAT 274 Query 6575 ATCGACTACGAAAAATGGAACAATCACCAGCGGAAAGAATCCAATGGGCCGGTATTC-CG 6633 | |||||||| |||||||||||||| || | ||| | |||| || || ||| | Sbjct 275 GTTGACTACGAGAAATGGAACAATCATCAAAGAGTGGAAGCAAATGACCCTGTCTTCACC 334 Query 6634 AGTAATGGGCCAATTCTTGGGCTTCCCCAATCTGATATCCAGAACGCACGAATTCTTTGA 6693 | | |||| || |||| || ||| ||| | | | | || | || |||||| | Sbjct 335 ATCATTGGGAAGGTTTTTGGTCT-CCCAAATGTCTTTGCACGCACTCCCGCATTCTTCCA 393 Query 6694 GAAAAGTTTGGTTTATTACAATGGCCGGCCAGATTTGATGAGAGTATCGGGGAATTCTTT 6753 ||||| | || ||||| | ||| |||||| ||||| ||| ||| |||| | Sbjct 394 AGAAAGTCTTGTGTATTATGGTCCCCGACCAGATCTGATGGAAGTTGTGGGAGATTCAGT 453 Query 6754 GACAAACACGACCAACCTGAGGGTTTGCTGGGAGGGCCAAGCCGGCGGTCTGGAAGGTTT 6813 | |||| | | | ||| || ||||| || || || || ||||||| | Sbjct 454 GTGCAACAAAGGCT-CTTTTTGGTGTGTTGGGAAGGACAGCTTGGTGGATTGGAAGGACT 512 Query 6814 GCGGCAGAAGGGATGGAGCATTTTGAACCTACTGGTGATTCAAAGAGAAGCCAAAATCCG 6873 | | |||||||| ||||| || | || || || || | | | || ||||| | ||| Sbjct 513 GAGACAGAAGGGTTGGAGTATCGTCAATCTCCTTGTTTTGCTTCGTGAGGCCAAGACCCG 572 Query 6874 GAACACCTCAGTGAAAGTTCTAGCACAGGGAGACAATCAGGTGATCTGTACCCAGTACAA 6933 ||| || | || ||| || ||||| ||||||||||| | || |||| | ||| || Sbjct 573 GAATACATTGGTCAAAACACTCGCACAAGGAGACAATCAACTCATATGTAACTCGTATAA 632 Query 6934 A 6934 | Sbjct 633 A 633 >seq66067 Length=1491 Score = 87.8 bits (96), Expect = 1e-13 Identities = 88/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 6325 GGACGACCTTGTGATTGGACTTAAAGGGAAAGAGAGAGA-ATTAAAATTGATTGGGCGTT 6383 ||||||||| | ||||||||||| || ||||| |||| ||||||| || || | | Sbjct 1032 GGACGACCTCATCATTGGACTTAAGGGCAAAGAATGAGAGATTAAAAAGGA-GGGAAGGT 1090 Query 6384 TCTTTTCTCTCATGTCTTGGAAATTGAGAGAATACTTCGTCATAACCGAGCA 6435 |||| || | |||||||||||| ||||| |||||||||| | |||||||| Sbjct 1091 TCTTCTCATTGATGTCTTGGAAAATGAGACAATACTTCGTGACCACCGAGCA 1142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35648989476384