Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_028234.1 Length=12162 Score E Sequences producing significant alignments: (Bits) Value seq12203 82.4 6e-12 >seq12203 Length=1511 Score = 82.4 bits (90), Expect = 6e-12 Identities = 162/237 (68%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 7502 GTCCCTCTATTTGAGGGACTAACTATGGCAGATGATTTGATCACAGTTGTGaaaaaaaTG 7561 || || ||||||| || || || |||||||| | || | || ||| ||||| || Sbjct 1409 GTACCCCTATTTGGAGGTCTCACCATGGCAGACAACTTAACCAAAGTCACAAAAAAGCTG 1350 Query 7562 ATTCGA-AACTCAAATGGACAAGGATTAAATGATTACAGTAGAATAACTATAGCAAATCA 7620 || || || ||| |||||||| ||| |||||| | || || || || || Sbjct 1349 -TTGGACAATTCATTGGGACAAGGGCAAAACGATTACCAATCTGTTACCATCGCCAACCA 1291 Query 7621 TATTGATTATGAAAAGTGGAATAATCATCAAAGAAAGGAATCAAATAAATATGTTTTTAA 7680 ||||||||||||||| ||||| || || |||||| || | | || | ||| || | Sbjct 1290 TATTGATTATGAAAAATGGAACAACCAACAAAGAGGAGACGCCGACAACTCTGTGTTCAC 1231 Query 7681 AGTTATGGGGCAATTCTTAGGTTATCCTAATTTAATTGTCAGAACCCATGAGTTTTT 7737 || |||||||||| ||| ||| || || || || | |||| || |||||||| Sbjct 1230 TGTGATGGGGCAATACTTGGGTCCGCCAAACTTGTTTAACCGAACTCACGAGTTTTT 1174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38713921403424