Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_028235.1 Length=12994 Score E Sequences producing significant alignments: (Bits) Value seq36615 100 2e-17 >seq36615 Length=1239 Score = 100 bits (110), Expect = 2e-17 Identities = 340/525 (65%), Gaps = 10/525 (2%) Strand=Plus/Plus Query 8288 AATGTCTTGGGAGTTGAGAGAATATTTTGTATATACAGAGTATTTAATAAAGGAGTATTT 8347 |||||| ||| | ||||| | || ||||| ||| | | || || |||||| || Sbjct 94 AATGTCATGGAGGATGAGACAGTACTTTGTTACAACAAAACACTTCATCAAGGAGCTTTA 153 Query 8348 TGTTCCATTATTCCATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTATTAAGAAAAT 8407 ||||| ||||| || ||||| ||||| ||||| || |||| | |||||| | Sbjct 154 CGTTCCCCTATTCTCAGGGTTGACAATGGCCGATGATCTCACAAAAGTGACCAAGAAACT 213 Query 8408 GTTGGAGAATGTAAGTGGACAAGGGTT-GGATAATTACGAGTATATATCAATTGCGAATC 8466 | || || | | || |||| || | ||||| | || || | || || | Sbjct 214 CCTCGACAACTCGA-TCAACCAGGGCCAGGTTGATTACCGTTCCATTTCTCTAGCCAACC 272 Query 8467 ATATTGATTATGAAAAATGGAACAATCATCAACGATACGAATCTAATTGTCATATTTTTA 8526 || |||| || || |||||||||||||||||| || ||| | ||| | | | || | Sbjct 273 ATGTTGACTACGAGAAATGGAACAATCATCAAAGAGTGGAAGCAAATGACCCTGTCTTCA 332 Query 8527 AAGTTATGGGTCAATGTTTTGGTCTTCCCAATTTGTTTTTACGTTCTCATGAATTTTTTC 8586 | || || | ||||||||| || ||| | ||| ||| ||| | ||| || | Sbjct 333 CCATCATTGGGAAGGTTTTTGGTCTCCCAAATGTCTTTGCACGCACTCCCGCATTCTTCC 392 Query 8587 AAAAAAGCCTGATTTATTACAACCAACGACCTGATCTGATGATCCCCTTAGAAGA--CAG 8644 || |||| || | ||||| | ||||| ||||||||| | | ||| ||| Sbjct 393 AAGAAAGTCTTGTGTATTATGGTCCCCGACCAGATCTGATGGAAGTTGTGGGAGATTCAG 452 Query 8645 GCTGGAATCTATTGATCCCAGTCAACTTGTTTGTTGGAATGGTCAAGCTGGAGGATTGGA 8704 || || | | | || | || |||||| | || || ||| |||||||| Sbjct 453 TGTGCAA-CAAAGGCTCTTTTTG-----GTGTGTTGGGAAGGACAGCTTGGTGGATTGGA 506 Query 8705 AGGATTGAGGCAAAAGGGTTGGTCAATTGTAAATCTACTTGTTATAGAAAGAGAATCCAA 8764 |||| |||| || ||||||||| || || ||||| |||||| | | || |||| Sbjct 507 AGGACTGAGACAGAAGGGTTGGAGTATCGTCAATCTCCTTGTTTTGCTTCGTGAGGCCAA 566 Query 8765 AATTAGGAATACGTTAGTCAAAATTTTGGCTCAAGGAGACAATCA 8809 | ||||||| || ||||||| | || |||||||||||||| Sbjct 567 GACCCGGAATACATTGGTCAAAACACTCGCACAAGGAGACAATCA 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41370195740192