Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_031083.1 Length=13169 Score E Sequences producing significant alignments: (Bits) Value seq8865 102 7e-18 >seq8865 Length=2261 Score = 102 bits (112), Expect = 7e-18 Identities = 141/192 (73%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 10018 AACGGGAGAAGACTGGACAGAGAGGGCCACA-GAGTATCAGCGGACGGGAAGTGCACTTC 10076 ||| |||||||||||| |||| | ||| | | ||| | || ||| ||||||| Sbjct 2186 AACCGGAGAAGACTGGTCAGAAGAGATTACAAGTTTTTCAA-GAACAGGATCAGCACTTC 2128 Query 10077 ACCGCTTCCACTGCTCACGGCAGAGTAGCGGAGGATTCACTTCGATAAGCCCTGCTGTCT 10136 |||||||| ||||| | ||||||||| |||||||||| ||| || || || || Sbjct 2127 ACCGCTTCTACTGCACCAGGCAGAGTAACGGAGGATTCGTTTCCATCAGTCCGACTCCGC 2068 Query 10137 TGACCTACGTGATGGTGACTGCCGATAC-ATGCAAAGAGTTGTCTAAGGGGAATTACGAC 10195 | || || |||| ||||| |||||||| ||| ||| | ||||| |||| ||||| || Sbjct 2067 TTACACACTTGATCGTGACAGCCGATACTATG-AAACAATTGTCACAGGGAAATTATGAT 2009 Query 10196 TTCATGTATCAA 10207 |||||| ||||| Sbjct 2008 TTCATGCATCAA 1997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41923028947856