Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_003243.1 Length=11822 Score E Sequences producing significant alignments: (Bits) Value seq133769 82.4 6e-12 >seq133769 Length=136818 Score = 82.4 bits (90), Expect = 6e-12 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 6935 GACGACCTGATAATAGGCTTGAAACCAAAAGAGAGAGAGTTGAAGATAGAGGGTCGATTC 6994 || ||| | || || || |||| ||||||||||||| |||||| |||||||||||| Sbjct 122651 GAAGACTTAATCATCGGACTGAAGGGAAAAGAGAGAGAGGTGAAGAAAGAGGGTCGATTT 122592 Query 6995 TTCGCTCTTATGTCCTGGAATTTGAGACTTTACTTTGT 7032 ||| |||| ||||| ||||| || ||| |||||||| Sbjct 122591 TTCTCTCTCATGTCGTGGAAGTTACGACAATACTTTGT 122554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37558426022368