Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_007020.1 Length=11440 Score E Sequences producing significant alignments: (Bits) Value seq133769 93.3 3e-15 >seq133769 Length=136818 Score = 93.3 bits (102), Expect = 3e-15 Identities = 124/171 (73%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 7295 TAATCAACAAAGACGAAACAATGCAAAGTGCAGACTTTTTAATTTATGGCAAGGTGCCAA 7354 ||||||||| ||| || || |||||||| | || ||| | ||||||||||| ||| Sbjct 121930 TAATCAACAGAGATGAGACCATGCAAAGCACTGATTTTCTGTCCTATGGCAAGGTACCAG 121871 Query 7355 TATTTAGGGGAAACATCACGATACCT---GAATCCAAGAAGTGGTCTCGAGTCAACTGCG 7411 | || || ||||||||| ||||| || | |||| ||||| ||||| | |||| Sbjct 121870 TGTTCAGAGGAAACATC---CTACCTTTAGAGGCAAAGAGATGGTCACGAGTTACATGCG 121814 Query 7412 TAACAAATGATCAGTTGCCCACATTCGGCAATGTAATGTCAACTGTTTCAA 7462 |||| |||||||| || || | || ||||||| | ||||| |||||| Sbjct 121813 TAACCAATGATCAATTACCTTCTTTGTCCAATGTACTTTCAACCATTTCAA 121763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36341107276352