Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001445.1 Length=9741 Score E Sequences producing significant alignments: (Bits) Value seq33068 95.1 8e-16 >seq33068 Length=655 Score = 95.1 bits (104), Expect = 8e-16 Identities = 262/402 (65%), Gaps = 0/402 (0%) Strand=Plus/Plus Query 1943 ATGTTGCTGTGTCACACACGAAGACGGCACACCACTGGAGTCTGAAATAATAAGTCCAAC 2002 |||||||||||| || || || || || || || | || || | | || || || Sbjct 173 ATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGAC 232 Query 2003 AAAGAATCATTTAGTTGTTGGTAACTCAGGTGATTCGAAGTATGTGGATTTGCCCACAGC 2062 |||| ||| ||||| | || || |||||| | ||||| | ||| |||| || | Sbjct 233 GAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATC 292 Query 2063 AAAAGGAGGTGCAATGTTCATAGCAAAGGCAGGTTATTGTTACATTAACATTTTCCTTGC 2122 | | || |||| |||||||||| ||||||||| || | || |||||||| || Sbjct 293 TGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGC 352 Query 2123 TATGCTGATCAACATAAATGAAGATGAAGCAAAAAGTTTCACAAAGACAGTGCGTGACAC 2182 ||||| | || | ||||| | |||||||| |||||| || | | ||||| Sbjct 353 AATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGT 412 Query 2183 TCTTGTACCTAAGCTTGGAACATGGCCATCGATGATGGACTTAGCTACAGCTTGCCACTT 2242 | | | || | |||||| ||||| || ||||||| | || || || | | Sbjct 413 TTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATAT 472 Query 2243 TCTCGCAGTTCTCTATCCAGAAACTCGGAATGCTGAGCTTCCACGAATACTCGTTGATCA 2302 ||| | || || |||| ||||| || ||||| | || | || || ||||| || Sbjct 473 TCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCA 532 Query 2303 CGAAGCAAAAATCTTTCATGTAGTTGACTCATTCGGATCACT 2344 || || ||| | | ||||| |||| || | |||||||| Sbjct 533 CGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACT 574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31043141418480