Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001555.1 Length=9494 Score E Sequences producing significant alignments: (Bits) Value seq33068 136 2e-28 >seq33068 Length=655 Score = 136 bits (150), Expect = 2e-28 Identities = 290/429 (68%), Gaps = 18/429 (4%) Strand=Plus/Plus Query 1910 GAATGGTAATTACGTGTACCCATGTTGTTGTGTTACTCTTGAAGATGGTAAGGCTCAATA 1969 |||||| ||||| | || ||||||| ||||| || | || ||||| | | || Sbjct 152 GAATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTA 211 Query 1970 TTCGGATCTAAAGCACCCAACGAAGAGACATCTGGTCATTGGCAACTCTGGCGATTCAAA 2029 || || || ||| ||| |||||||| ||||| || || || ||||| ||| |||| Sbjct 212 CTCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAA 271 Query 2030 GTACCTAGACCTTCCAGT-TCTCAATGAAGAGAAAATGTATATAGCTAATGAAGGTTATT 2088 |||| | || || |||| ||| | | ||| ||||||||||| || |||||||||| Sbjct 272 GTACATTGATCTGCCAGCATCTGAG-GCAGAACGTATGTATATAGCAAAGGAAGGTTATT 330 Query 2089 GCTACATGAACATTTTCTTTGCTCTACTAGTGAATGTCAAGGAAGAGGATGCAAAGGACT 2148 |||| | || |||||| | || | || || ||||| || || | || |||||||| | Sbjct 331 GCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATT 390 Query 2149 TCACCAAGTTTATAAGGGACACAATTGTTCCAAAGCTTGGAGCGTGGCCAACAATGCAAG 2208 ||||||| | || | || | | || | |||||| |||||| || || | Sbjct 391 TCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGG 450 Query 2209 ATGTTGCAACTGCATGCTACTTACT-------TTCCATTCTTTACCCAGATGTCCTGAGA 2261 |||||||||||||| || | || |||||| || | | ||| | Sbjct 451 ATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGAT-------GC 503 Query 2262 GCTGAACTACCCAGAATTTTGGTTGATCATGACAACA-AAACAATGCATGTTTTGGATTC 2320 |||||| ||||||| || | ||||| || | | ||| |||| |||||||| | ||||| Sbjct 504 GCTGAATTACCCAGGATCCTTGTTGACCACG-CTACACAAACCATGCATGTCATTGATTC 562 Query 2321 GTATGGGTC 2329 ||||| || Sbjct 563 TTATGGATC 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30253068679648