Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001768.1 Length=9475 Score E Sequences producing significant alignments: (Bits) Value seq33068 150 1e-32 >seq33068 Length=655 Score = 150 bits (166), Expect = 1e-32 Identities = 295/427 (69%), Gaps = 12/427 (3%) Strand=Plus/Plus Query 1823 AGGATGGTAATTATAGGTACCCATGCTGCTGCGTCACTCTCGAAGATGGTAGTCCAATGT 1882 || |||| ||||||| || |||| ||||| || || | || ||||| | || |||| Sbjct 151 AGAATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGT 210 Query 1883 ACTCAGAGCTTAAAATGCCAACGAAAAATCATCTAGTAATTGGCAATTCAGGGGATCCGA 1942 |||| |||||||| | || ||||| | |||||||| || || ||| || ||||| | Sbjct 211 ACTCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAA 270 Query 1943 AATACTTGGATCTACCAGGTGAAATTAG-CA-ATCTTATGTACATAGCAAAGGAAGGATA 2000 | ||| | ||||| |||| | | || || | | |||||| |||||||||||||| || Sbjct 271 AGTACATTGATCTGCCAGC--ATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTA 328 Query 2001 TTGTTATATCAACATATTTCTTGCAATGCTTGTTAATGTTGATGA-AGCTAACGCCAAGG 2059 ||| ||| |||| || || || ||||||||||| |||||| |||| | | || || |||| Sbjct 329 TTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAA-GCAAAGG 387 Query 2060 ACTTTACTAAGAGAGTGAGGGACGAGTCAGTACAAAAGCTTGGAAAGTGGCCAAGTTTAA 2119 | || || || | | | || | | | | | |||||| ||||||| || | Sbjct 388 ATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGA 447 Query 2120 TAGATGTCGCAACTGAATGTGCCT-TACTATCTACATATT--ATCCTGCGGCGGCTAGTG 2176 | ||||| ||||||| | || | || | | | |||| |||||| || | | Sbjct 448 TGGATGTTGCAACTGCA---GCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCG 504 Query 2177 CAGAACTACCCAGGCTTCTAGTAGATCATGCTCAAAAGACAATTCACGTTGTGGATTCTT 2236 | ||| |||||||| | || || || || ||| | | || || || || | ||||||| Sbjct 505 CTGAATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTT 564 Query 2237 ATGGGTC 2243 |||| || Sbjct 565 ATGGATC 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30192293853584