Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02]
36,804 sequences; 236,236,391 total letters
Query= NC_001785.1
Length=10326
Score E
Sequences producing significant alignments: (Bits) Value
seq33068 136 3e-28
>seq33068
Length=655
Score = 136 bits (150), Expect = 3e-28
Identities = 312/462 (68%), Gaps = 6/462 (1%)
Strand=Plus/Plus
Query 2596 ATGTAGCTGCGTAACTTTAGATGATGGAACTCCAGCGACAAGTGAGTTGAAAACTCCTAC 2655
|||| |||| ||||| | ||||||||||| || | ||| | || | || ||
Sbjct 173 ATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGAC 232
Query 2656 CAAGAATCACATCGTTCTTGGTAATTCTGGTGATCCTAAGTACGTTGACCTGCCGACTCT 2715
|||| || | ||| | || |||||||||||| |||||| |||| ||||| |
Sbjct 233 GAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATC 292
Query 2716 TGAGTCTGATTCGATGTACATAGCTAAAAAGGGTTATTGCTACATGAACAtttttttAGC 2775
|||| | || ||||| ||||| || | ||||||||||| | || ||||| | ||
Sbjct 293 TGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGC 352
Query 2776 TATGCTCATAAACATACCTGAAAATGAGGCGAAGGACTTCACAAAAAGGGTTCGTGACCT 2835
||||| |||| | ||| || || || ||||| ||||| |||| | ||||||| |
Sbjct 353 AATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGT 412
Query 2836 TGTGGGTTCAAAACTTGGAGAGTGGCCAACGATGCTAGATGTCGCAACATGC-GCAAATC 2894
| || | | ||||| ||||||| | || | ||||| ||||| ||| ||| ||
Sbjct 413 TTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAAC-TGCAGCATATA 471
Query 2895 AGCTGGTAGTTTTTCATCCTGACGCAGCCA-ACGCAGAATTACCGCAAATTCTAGTGGAT 2953
|| | || || |||||||| | || | ||| |||||||| || || || ||
Sbjct 472 TTCTAGGCGTATTCCATCCTGAAAC-GCGATGCGCTGAATTACCCAGGATCCTTGTTGAC 530
Query 2954 CAC-CGACAGAAAACAATGCATGTCATCGATTCTTTTGGGTCCGTGGATTCTGGATATCA 3012
||| | ||| |||| ||||||||||| ||||||| ||| || | | ||| |||||
Sbjct 531 CACGCTACA-CAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCA 589
Query 3013 TATATTGAAGGCAAATACAGTCAATCAGCTGATCCAATTCGC 3054
| | ||||| || |||||||| | || ||||| ||
Sbjct 590 CGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGC 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 32914366326240
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |