Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_002509.2 Length=9835 Score E Sequences producing significant alignments: (Bits) Value seq33068 107 1e-19 >seq33068 Length=655 Score = 107 bits (118), Expect = 1e-19 Identities = 249/367 (68%), Gaps = 14/367 (4%) Strand=Plus/Plus Query 2156 CATCTAGTGATTGGTAACAGC-GGTGATCCAAAGTACATAGATCTCCCTGAGATC-GAGG 2213 |||||||| || || | | | ||||||||||||||||| ||||| || | ||| |||| Sbjct 240 CATCTAGTTATAGG-AGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGC-ATCTGAGG 297 Query 2214 -AGAATAAAATGTACATAGCGAAAGAAGGTTATTGTTACATCAATATCTTCCTAGCCATG 2272 |||| | |||| ||||| || ||||||||||| || ||||||| ||||| || ||| Sbjct 298 CAGAACGTA-TGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATG 356 Query 2273 TTGGTAAATGTCAAGGAGTCGCAGGCAAAGGAGTTCACGAAAGTTGTTAGGGACAAACTA 2332 | |||||||| || ||| | |||||||| ||||| ||| | || | || | Sbjct 357 CTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTG 416 Query 2333 GTTGGCGAACTTGGCAAGTGGCCCACTCTGTTAGATGTAGCAACCGCTTGTTATTTCCTG 2392 | | ||||| ||||||| | || | ||||| ||||| || ||| | || Sbjct 417 ATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTA 476 Query 2393 AAAGTATTTTACCCAGA----CGTTGCTAACGCCGAATTGCCACGCATGCTAGTGGACCA 2448 ||||| | || || || || ||| ||||| || | || || || ||||| Sbjct 477 GGCGTATTCCATCCTGAAACGCGATG----CGCTGAATTACCCAGGATCCTTGTTGACCA 532 Query 2449 TAAGACAAAGATAATTCATGTCGTTGATTCATATGGGTCACTGTCAACTGGATATCATGT 2508 ||| | | || |||||| ||||||| ||||| ||||| | ||| ||||| || Sbjct 533 CGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCACGT 592 Query 2509 CCTTAAG 2515 || ||| Sbjct 593 GCTCAAG 599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31343816873744