Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_002634.1 Length=9588 Score E Sequences producing significant alignments: (Bits) Value seq33068 262 2e-66 >seq33068 Length=655 Score = 262 bits (290), Expect = 2e-66 Identities = 430/617 (70%), Gaps = 2/617 (0%) Strand=Plus/Plus Query 1792 AGTTGGCAATTGGGTCACTCATTGTGCCGTTGGATTTTGAGCGCGCTCGAATGGCATTAC 1851 ||||||| || || ||| | ||||| || | |||| || | || || | ||| ||| Sbjct 40 AGTTGGCCATAGGCTCATTGATTGTACCACTCAATTTGGATAGGGCACGCACTGCACTAC 99 Query 1852 AGGGCAAGAGCGTA-ACAAGAGAGCCAATTACAATGTCATGTATCTCAAGACAAGACGGA 1910 || ||||| | | |||| ||||| | ||| | ||| |||| ||| | ||| Sbjct 100 TTGGAGAGAGCATTGAGAAGA-AGCCACTCACATCAGCGTGTGTCTCCCAACAGAATGGA 158 Query 1911 AACTTTGTGTATCCTTGTTGTTGTGTCACACATGATGATGGCAAAGCTTTCTATTCTGAG 1970 || | | | | | ||||| ||||| || |||||||| | | | || || ||| Sbjct 159 AATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAG 218 Query 1971 CTCAGGAGTCCTACAAAGCGCCACTTGGTTATTGGAACATCTGGTGACCCGAAATACATT 2030 || | ||| || || ||| | || | ||||| ||| | |||||||| || || |||||| Sbjct 219 CTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATT 278 Query 2031 GATCTACCAGCCACTGATGCAGACAGGATGTACATAGCTAAAGAAGGATTTTGTTATCTT 2090 ||||| ||||| |||| ||||| | ||||| ||||| || ||||| | ||| ||||| Sbjct 279 GATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTC 338 Query 2091 AACATCTTCTTGGCAATGTTGGTTAATGTAAATGAAGATGAGGCCAAAGACTTCACGAAG 2150 || || ||| | |||||| | || ||||| ||||| | || || || || ||||| || Sbjct 339 AATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAA 398 Query 2151 ATGGTAAGGGATGTCATTGTACCAAGGTTAGGAAAGTGGCCGACAATGTTAGATGTAGCA 2210 ||| | | ||||| | | || | | | || ||||||| || || | ||||| ||| Sbjct 399 ATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCA 458 Query 2211 ACAGCTGCATACATGCTAACAGTTTTTCACCCTGAAACCAGGAATGCTGAGCTCCCACGT 2270 || || ||||| || ||| || || || |||||||| | ||||| | || | Sbjct 459 ACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGG 518 Query 2271 ATTTTGGTTGACCATGCGTGTCAAACCATGCACGTGATTGACTCTTTTGGATCCTTGACA 2330 || | |||||||| || ||||||||||| || ||||| |||| |||||| | || Sbjct 519 ATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACT 578 Query 2331 GTTGGGTACCATGTTCTTAAAGCTGGTACAGTGAATCAATTAATTCAATTTGCTTCTAAT 2390 |||||||| || || || || || || || || ||||| |||||||||||||| || ||| Sbjct 579 GTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGCCTCAAAT 638 Query 2391 GACCTTCAGAGTGAGAT 2407 || || || || ||||| Sbjct 639 GATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30553744134912