Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_003224.1 Length=9591 Score E Sequences producing significant alignments: (Bits) Value seq33068 993 0.0 >seq33068 Length=655 Score = 993 bits (1100), Expect = 0.0 Identities = 613/655 (94%), Gaps = 0/655 (0%) Strand=Plus/Plus Query 1763 CGAAATACGTAGTGCGAAACTTTCCAAATGGTACTCGTAAGTTGGCCATAGGCTCTTTGA 1822 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 CGAAGTACGTAGTGCGAAACTTTCCAAATGGTACTCGTAAGTTGGCCATAGGCTCATTGA 60 Query 1823 TTGTACCACTCAACTTGGATAGGGCACGCACTGCACTTCTTGGAGAGAGTATTGAGAAGA 1882 ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 61 TTGTACCACTCAATTTGGATAGGGCACGCACTGCACTACTTGGAGAGAGCATTGAGAAGA 120 Query 1883 AGCCGCTCACATCAGCATGTGTCTCCAAACAGAATGGAAATTATATACACTCATGCTGCT 1942 |||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| Sbjct 121 AGCCACTCACATCAGCGTGTGTCTCCCAACAGAATGGAAATTATATACACTCATGTTGCT 180 Query 1943 GCGTAACGATGGATGATGGAACCCCGATGTACTCAGAACTTAAGAGCCCAACGAAGAGGC 2002 | |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct 181 GTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGACGAAGAGGC 240 Query 2003 ACCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATTTACCAGCATCTGAGGCAG 2062 | ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 241 ATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCAG 300 Query 2063 AACGCATGTATATAGCAAAGGAAGGTTATTGCTATCTTAACATTTTCCTCGCAATGCTTG 2122 |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 301 AACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTG 360 Query 2123 TGAATGTTAACGAGAACGAGGCAAAGGATTTCACTAAAATGATTCGTGATGTTTTGATCC 2182 | |||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 361 TAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCC 420 Query 2183 CTATGCTTGGGCAATGGCCTTCGTTGATGGATGTTGCAACTGCAGCATACATTCTAGGTG 2242 | ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| | Sbjct 421 CCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCG 480 Query 2243 TATTCCATCCTGAAACACGATGTGCTGAATTACCTAGGATTCTTGTTGATCACCGTACGC 2302 |||||||||||||||| ||||| ||||||||||| ||||| |||||||| ||| ||| | Sbjct 481 TATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACAC 540 Query 2303 AAACCATGCATGTCATTGATTCATATGGATCATTAACTGTTGGTTATCACGTGCTCAAGG 2362 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct 541 AAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGG 600 Query 2363 CCGGAACTGTCAATCATTTAATTCAATTCGCCTCAAATGATCTACAGAGCGAGAT 2417 |||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct 601 CCGGAACTGTCAATCATTTAATTCAATTTGCCTCAAATGATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30563340160080