Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_003399.1 Length=9324 Score E Sequences producing significant alignments: (Bits) Value seq33068 80.6 2e-11 >seq33068 Length=655 Score = 80.6 bits (88), Expect = 2e-11 Identities = 212/317 (67%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 1699 TGGGGATTCTAAGTACATAGACATGCCAAATACAGAAGGTCAGAAG--ATGTACATAGCC 1756 ||| ||| | |||||||| || ||||| | || | ||||| ||||| ||||| Sbjct 260 TGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGG--CAGAACGTATGTATATAGCA 317 Query 1757 AAGAATGGGTACTGTTACATGAATATATTTTTAGCCATGTTAGTTAATGTTAATGAAATA 1816 ||| | || || || || | ||||| || | || ||| | || ||||||||||| | Sbjct 318 AAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAAC 377 Query 1817 GAAGCTAAAGCATTCACAAAGATGGTTAGAGATATAGT-AGTAGAACGATTAGGGCAATG 1875 ||||| || | ||||| || ||| || | ||| | | | | | || ||||| || Sbjct 378 GAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTT-GGGCAGTG 436 Query 1876 GCCCTCACTGCTCGATGTGGCAACAGCATGTTATCTTCTAAAGGTCTTCTTTCC--AGAC 1933 ||| ||| || | ||||| ||||| ||| ||| ||||| || ||| ||| | || Sbjct 437 GCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAAC 496 Query 1934 GTTAATAATGCAGAGCTACCAAGAATGTTGGTTGATCACACCACAAAAACAATCCATGTG 1993 | | || || |||| || || | ||||| ||| | ||| |||| || ||||| Sbjct 497 GCGA--TGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTC 554 Query 1994 CTCGACTCATATGGATC 2010 | || || |||||||| Sbjct 555 ATTGATTCTTATGGATC 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29709293920128