Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_003537.1 Length=10038 Score E Sequences producing significant alignments: (Bits) Value seq33068 172 4e-39 >seq33068 Length=655 Score = 172 bits (190), Expect = 4e-39 Identities = 358/533 (67%), Gaps = 0/533 (0%) Strand=Plus/Plus Query 2145 CCACTAACAATGGCATGTGTCTCAAGACAGGACAACAACTATGTGTATACTTGCTGTTGT 2204 ||||| ||| || |||||||| |||| | || ||| | | | || || ||| Sbjct 123 CCACTCACATCAGCGTGTGTCTCCCAACAGAATGGAAATTATATACACTCATGTTGCTGT 182 Query 2205 GTGACTAATGAAGACGGAACACCAATGTTGTCAGAGTTGAGAAGCCCTACAAAGCACCAC 2264 || || | || || ||||| || |||| || ||| | | ||||| || ||| || Sbjct 183 GTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGACGAAGAGGCAT 242 Query 2265 CTAGTACTCGGCAACACTGGTGATTCTAAATTTGTAGATTTACCAGCCCTAGAAACTAAC 2324 ||||| | || |||||||| | || | | ||| | ||||| || | | Sbjct 243 CTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCAGAA 302 Query 2325 AGAATGTATATAGCTAAGAGTGGTTTTTGTTACATGAACATATTCCTTGCTATGCTCATT 2384 | ||||||||||| ||| |||| ||| || | || || ||||| || ||||| | Sbjct 303 CGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTA 362 Query 2385 AATGTCAATGAAAGTGCGGCCAAGAATTTCACAAAAATGGTGCGTGATAGATTGGTCCCA 2444 ||||| ||||| | | || ||| ||||||| |||||| | |||||| ||| |||| Sbjct 363 AATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCC 422 Query 2445 ATGCTAGGTGAATGGCCTACAGTGCAAGATTTGGCCACATCCATGTACATCCTCACAGTG 2504 ||||| || | |||||| || || ||| | || || | || || || || Sbjct 423 ATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGTA 482 Query 2505 TTCCACCCTGAAACACGTAATGCCGAGCTACCCAGGATTTTAGTGGACCACACGACTCAA 2564 ||||| |||||||| || || || |||||||||| | || |||||| | || ||| Sbjct 483 TTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACAA 542 Query 2565 ACAATGCATGTAATTGATTCGTATGGTTCTCTAAGCACTGGATATCATATTCTGAAAGCA 2624 || |||||||| |||||||| ||||| || |||| ||| ||||| | || || || Sbjct 543 ACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGGCC 602 Query 2625 GGGACTGTGGGGCAATTCCTTCATTTTGCCGCAGATGATCTCAAGAGTGAGAT 2677 || ||||| || || |||| |||||| || ||||||| | || ||||| Sbjct 603 GGAACTGTCAATCATTTAATTCAATTTGCCTCAAATGATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31993147910112