Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_004047.1 Length=9612 Score E Sequences producing significant alignments: (Bits) Value seq33068 313 2e-81 >seq33068 Length=655 Score = 313 bits (346), Expect = 2e-81 Identities = 373/506 (74%), Gaps = 0/506 (0%) Strand=Plus/Plus Query 1967 CAGGATGGGAATTTTGTATACCCGTGCTGTTGTGTCACGCAGGATGATGGCAGACCGTTC 2026 ||| |||| |||| | || || | || || ||||| ||| ||||||||| | ||| | Sbjct 150 CAGAATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATG 209 Query 2027 TATTCTGAGTTGAAGAGCCCAACAAAGCGGCACTTAGTGGTGGGAACCTCGGGAGACCCA 2086 || || ||| | |||||||| || ||| |||| |||| | ||| | || || || ||| Sbjct 210 TACTCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCA 269 Query 2087 AAATACATTGATTTGCCAGCGACAGATTCTGATCGCATGTACATAGCAAAAGAGGGATAT 2146 || ||||||||| ||||||| | || | || || ||||| |||||||| || || ||| Sbjct 270 AAGTACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTAT 329 Query 2147 TGCTACCTCAACATCTTTTTGGCAATGCTGGTAAATGTTAATGAAGATGAAGCAAAGGAT 2206 ||||| ||||| || || | |||||||| |||||||||||||| | |||||||||||| Sbjct 330 TGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGAT 389 Query 2207 TTTACAAAGATGGTGCGAGATGTGGTCGTGCCAAAACTTGGAACATGGCCGAGCATGATG 2266 || || || ||| | || ||||| | | || | ||||| ||||| ||||| Sbjct 390 TTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATG 449 Query 2267 GATGTTGCTACGGCAGTTTACATAATGACAGTTTTCCATCCTGAGACAAGGAGTGCAGAG 2326 |||||||| || |||| || || | || ||||||||||| || | | || || Sbjct 450 GATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAA 509 Query 2327 TTACCACGGATACTAGTCGATCATGCTAGTCAAACAATGCATGTGATTGACTCATTTGGC 2386 ||||| |||| || || || || |||| ||||| |||||||| ||||| || | ||| Sbjct 510 TTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGA 569 Query 2387 TCGTTATCTGTTGGATACCATGTGTTAAAGGCGGGAACTGTTAATCAATTAATTCAGTTT 2446 || || ||||||| || || ||| | ||||| |||||||| ||||| |||||||| ||| Sbjct 570 TCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTT 629 Query 2447 GCCTCCAATGATTTGGAAGGAGAGAT 2472 ||||| |||||| || || | ||||| Sbjct 630 GCCTCAAATGATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30630512336256