Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_004426.1 Length=9878 Score E Sequences producing significant alignments: (Bits) Value seq33068 82.4 5e-12 >seq33068 Length=655 Score = 82.4 bits (90), Expect = 5e-12 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 1972 CCAACTAAGAGACATCTAGTGATCGGGAATACTGGTGATACAAAGTATGTCGATTTACCA 2031 || || ||||| |||||||| || || | |||||||| ||||||| | ||| | ||| Sbjct 228 CCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCA 287 Query 2032 AAAGGCGAAACTGATTTGCTTTACATGGCGATAGATGGGTACTGCTACATCAATATATTC 2091 | || | || | || || || | || || || ||||| ||||||| ||| Sbjct 288 GCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTC 347 Query 2092 TTAGCAATGCTCATCAATGTGCGTGAAGATGAAGCTAAGGATTTCACTAAGAAAGTTCGG 2151 | |||||||| | ||||| ||| | ||||| ||||||||||| || | |||| Sbjct 348 CTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGT 407 Query 2152 GACATCTTCATTCCTAAGCTTGGTAAGTGGCCGTCCATGCTTGATTTAGCCAC 2204 || | || || || | |||||| ||||||| || || | ||| | || || Sbjct 408 GATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAAC 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31481359901152