Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_005028.1 Length=10155 Score E Sequences producing significant alignments: (Bits) Value seq33068 152 3e-33 >seq33068 Length=655 Score = 152 bits (168), Expect = 3e-33 Identities = 278/401 (69%), Gaps = 7/401 (2%) Strand=Plus/Plus Query 2455 TGCTGTGTTACAATGGAAGATGGTACGCCATTGTTTTCTGATATCAAGATGCCAACTAAG 2514 |||||||| || ||||| ||||| || || ||| || || | |||| || || ||| Sbjct 177 TGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGACGAAG 236 Query 2515 AATCATCTAGTCATTGGAAATTCAGGAGATCCAAAGTATGTGGATGTACCAAGCAGCTCA 2574 | |||||||| || ||| ||| || ||||||||||| | ||| | ||| ||| || | Sbjct 237 AGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCA-GCATCTGA 295 Query 2575 AGTG--AC--ATGATTGTGGCTAAGGAAGGTTATTGTTATCTCAACATTTTCTTGGCAAT 2630 | || ||| | | || |||||||||||||| |||||||| |||||| | ||||| Sbjct 296 GGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAAT 355 Query 2631 GTTGCTGAATGTGAATGAGAGTGAATCAAAATCATTCACAAAGAAGGTTAGAGATATAAT 2690 | | | ||||| ||||||| ||| |||| ||||| || | | || | ||| | | Sbjct 356 GCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGT-TT 414 Query 2691 TGTACCGCGT-CTCGGTCAATGGCCAAGCTTAATCGATGTTGCAACTGAATGTTACTTCC 2749 || || | | || || || ||||| || || ||||||||||||| | || | | Sbjct 415 TGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTC 474 Query 2750 TATCAGCCTTCCACCCTGAAACGAAAAATGCTGAGTTGCCCCGAATTCTAGTGGATCATA 2809 || | ||||| ||||||||| | ||||| || ||| | || || || || || Sbjct 475 TAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACG 534 Query 2810 CATCAAAATGTATGCATGTGATCGATTCATATGGCTCGCTA 2850 | || || |||||||| || ||||| ||||| || ||| Sbjct 535 CTACACAAACCATGCATGTCATTGATTCTTATGGATCACTA 575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32367392891664