Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_005304.1 Length=9591 Score E Sequences producing significant alignments: (Bits) Value seq33068 226 2e-55 >seq33068 Length=655 Score = 226 bits (250), Expect = 2e-55 Identities = 352/503 (70%), Gaps = 0/503 (0%) Strand=Plus/Plus Query 1954 AACGGAAATTATGTTTACACTAGCTGTTGTGTCACTCTAGATGACGGAACCCCATTGTAT 2013 || ||||||||| | || | | || ||||| || | ||||| |||||||| |||| Sbjct 153 AATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTAC 212 Query 2014 TCCAACATTAAGAACCCCACAAAGAGACACTTGGTTGTTGGAACAACTGGAGATCCGAAG 2073 ||| | |||||| ||| || ||||| || | ||| | ||| | |||| ||||| ||| Sbjct 213 TCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAG 272 Query 2074 ATAGTTGACCTACCTGCAACAGACACAGACAAGATGTACATAGCAAAAGAGGGATATTGC 2133 |||| || || ||| | || |||| ||||| |||||||| || || |||||| Sbjct 273 TACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGC 332 Query 2134 TATTTGAATATCTTCTTAGCTATGCTCATCAATGTCAACGAAAATGAAGCAAAGGCCTTC 2193 ||| | ||||| ||| | || ||||| | ||||| || || || |||||||||| ||| Sbjct 333 TATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTC 392 Query 2194 ACAAAAATGGTTCGTGACATTATTATCCCAATGCTTGGAACATGGCCAACTATGCAAGAT 2253 || |||||| ||||||| || | ||||| |||||||| ||||| | || ||| Sbjct 393 ACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGAT 452 Query 2254 CTTGCAACAGCATGTTTCATGATGACAGCTTTCTTTCCAGAGACAAGTAGTGCGGAACTG 2313 ||||||| ||| | || | | ||| ||| || || | | || ||| | Sbjct 453 GTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTA 512 Query 2314 CCGAGGATACTAGTTGATCACACAAACCAGACAATGCATGTCATTGATTCATTTGGTTCA 2373 || ||||| || ||||| ||| | | || || ||||||||||||||||| | ||| ||| Sbjct 513 CCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCA 572 Query 2374 TTAACAACTGGGTACCACGTACTCAAGGCAGGAACAGCCGCTCAACTTATCGATTTTGCT 2433 |||| |||||| ||||| |||||||| ||||| | | ||| | || | ||||| Sbjct 573 CTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGCC 632 Query 2434 TCAACAGAGCTTGAAGGAGAGAT 2456 |||| || || || | ||||| Sbjct 633 TCAAATGATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30563340160080