Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_006262.1 Length=10035 Score E Sequences producing significant alignments: (Bits) Value seq33068 324 9e-85 >seq33068 Length=655 Score = 324 bits (358), Expect = 9e-85 Identities = 440/614 (72%), Gaps = 0/614 (0%) Strand=Plus/Plus Query 2200 TTGGCAATCGGGTCGCTCATTGTACCATTAGATTTTGAACGTGCACGCACGGCATTGCAA 2259 ||||| || || || | ||||||||| | |||| || | |||||||| ||| | | Sbjct 42 TTGGCCATAGGCTCATTGATTGTACCACTCAATTTGGATAGGGCACGCACTGCACTACTT 101 Query 2260 GGTAAAAGCATAGCAAAGGAACCAATCACAATGGCGTGCATTTCCAGGCAGGATGGTAAT 2319 || | ||||| | ||| | ||| ||||| ||||| | ||| ||| |||| ||| Sbjct 102 GGAGAGAGCATTGAGAAGAAGCCACTCACATCAGCGTGTGTCTCCCAACAGAATGGAAAT 161 Query 2320 TTTGTATATCCTTGCTGTTGTGTCACACATGACGATGGGAAGGCTTTCTATTCAGAACTC 2379 | | || | | || || ||||| || || ||||| | | | || || || || Sbjct 162 TATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTT 221 Query 2380 AAAAGCCCTACAAAACGTCACTTGGTTATTGGAACGTCTGGTGATCCGAAATACATTGAC 2439 || ||||| || || | || | ||||| ||| | ||||||||||| || |||||||| Sbjct 222 AAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGAT 281 Query 2440 CTCCCAGCCACAGAGACAGATCGCATGTATATAGCGAAGGAAGGATATTGCTACCTCAAC 2499 || ||||| | ||| |||| || ||||||||||| |||||||| |||||||| ||||| Sbjct 282 CTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAAT 341 Query 2500 ATCTTCTTAGCAATGTTAGTCAATGTTAATGAGGATGAAGCCAAAGATTTCACCAAAATG 2559 || ||| | |||||| | || |||||||||||| | ||||| || ||||||||||||||| Sbjct 342 ATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATG 401 Query 2560 GTTAGGGATGTTATAGTGCCAAAACTTGGGCAATGGCCAACAATGTTTGATGTGGCCACA 2619 || | |||||| | | || | |||||||| ||||| || || | ||||| || || Sbjct 402 ATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACT 461 Query 2620 GCTGTGTATATGTTGACAGTTTTTCATCCTGAAACTAGGAATGCTGAACTTCCACGCATT 2679 || | ||||| | || || ||||||||||| | |||||| | || | || Sbjct 462 GCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATC 521 Query 2680 TTAGTTGATCACGCAAGCCAAACTATGCACGTTATAGATTCCTTCGGATCTTTGACAGTT 2739 | ||||| ||||| | ||||| ||||| || || ||||| | ||||| | || ||| Sbjct 522 CTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTT 581 Query 2740 GGGTATCACGTCTTGAAAGCTGGTACAGTGAATCAACTTATTCAATTTGCATCAAATGAC 2799 ||||||||||| | || || || || || ||||| | ||||||||||| |||||||| Sbjct 582 GGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGCCTCAAATGAT 641 Query 2800 TTGCACAGCGAAAT 2813 |||| ||||| || Sbjct 642 CTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31983551884944