Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_007180.1 Length=9723 Score E Sequences producing significant alignments: (Bits) Value seq33068 86.0 4e-13 >seq33068 Length=655 Score = 86.0 bits (94), Expect = 4e-13 Identities = 185/269 (69%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 2192 ATGTATATAGCGAAAGATGGTTATTGCTATATAAACATATTCTTTGCTATGCTAATAAAC 2251 ||||||||||| || || |||||||||||| | || || ||| | || ||||| |||| Sbjct 306 ATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAAT 365 Query 2252 GTCCGGGAAGATCAAGCTAAATCATTCACGAAGATGGTGCGTGATATGATAATTCCGAAG 2311 || || | |||| || ||||| || ||| | |||||| | | || || | | Sbjct 366 GTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATG 425 Query 2312 CTTGGTGTCTGGCCAACAGTTATGGATGTCGCAACAACTTGCAAAT-TACTGACTGTTTT 2370 ||||| ||||| || | |||||||| ||||| | ||| || | || || || Sbjct 426 CTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGC-AGCATATATTCTAGGCGTATT 484 Query 2371 CTTCCCTGACACAGCTA-ACGCAGAATTACCACGCATATACGTAGACCACGC-ACATAAA 2428 | ||||| || || | ||| |||||||| | || || |||||||| ||| || Sbjct 485 CCATCCTGAAAC-GCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACA-CAA 542 Query 2429 ATGATGCACGTCATAGATTCATATGGCTC 2457 | ||||| ||||| ||||| ||||| || Sbjct 543 ACCATGCATGTCATTGATTCTTATGGATC 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30985565267472