Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_007433.1 Length=10429 Score E Sequences producing significant alignments: (Bits) Value seq33068 89.7 3e-14 >seq33068 Length=655 Score = 89.7 bits (98), Expect = 3e-14 Identities = 166/235 (71%), Gaps = 18/235 (8%) Strand=Plus/Plus Query 2308 CATGTTGTTGTGTAACAATGGATGATGGGAAACCGCTATGT--TCCGAA-TTACGATTCC 2364 ||||||| |||||||| ||||||||||| |||| | |||| ||||| ||| || || Sbjct 172 CATGTTGCTGTGTAACGATGGATGATGG--AACCCCGATGTACTCCGAGCTTAAGAG-CC 228 Query 2365 CAACGAAGAATCATCTAATAATAGGTAATAGTGGGGATGATAAAAATGTACAGCTACCAC 2424 | ||||||| |||||| | ||||| | ||| |||| ||| ||||| | | Sbjct 229 CGACGAAGAGGCATCTAGTTATAGGAGCTTCTGG---TGATCCAAA-GTACATTGATCTG 284 Query 2425 CAAGC-TCTGATGGGCA-----TATGTATATAGTGAAAGATGGTTTTTGTTATGTCCTCA 2478 | ||| ||||| |||| ||||||||||| || || |||| ||| ||| || | Sbjct 285 CCAGCATCTGA--GGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATA 342 Query 2479 TATTCCTCGCGATGTTAATAAACGTTTCTGAGGGTGATGCAAAGGGTTTTACGAA 2533 | |||||||| ||| | |||| ||| |||| || ||||||| ||| || || Sbjct 343 TTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAA 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 33243829857008