Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_007728.1 Length=10046 Score E Sequences producing significant alignments: (Bits) Value seq33068 340 1e-89 >seq33068 Length=655 Score = 340 bits (376), Expect = 1e-89 Identities = 462/642 (72%), Gaps = 2/642 (0%) Strand=Plus/Plus Query 2133 AAGTATGTAGTGCGACGTAATCCAAATGGCCAGAGGAAACTTGCTATTGGCTCATTGATT 2192 ||||| ||||||||| ||||||||| | || | || || |||||||||||| Sbjct 3 AAGTACGTAGTGCGAAACTTTCCAAATGGTACTCGTAAGTTGGCCATAGGCTCATTGATT 62 Query 2193 GTACCATTGGATTTCGATCGTGCTAGGCTAGCATTGCAGGGCGCAAGCATAACAAGGGAG 2252 |||||| | |||| ||| | || | ||| | | || | ||||| | | || Sbjct 63 GTACCACTCAATTTGGATAGGGCACGCACTGCACTACTTGGAGAGAGCATTGAGAAGAAG 122 Query 2253 TCATTGACTATGGCATGCATCTCTAGACAGAATAATAATTTTGTTTACCCTTGTTGCTGT 2312 || | || || || |||| ||||||| |||| | | || | ||||||||| Sbjct 123 CCACTCACATCAGCGTGTGTCTCCCAACAGAATGGAAATTATATACACTCATGTTGCTGT 182 Query 2313 GTCACACATGACGACGGTACGCCACTTTACTCCGATCTTAAGAGCCCAACGAAGAGGCAC 2372 || || || || || || || | |||||||| ||||||||||| ||||||||||| Sbjct 183 GTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGACGAAGAGGCAT 242 Query 2373 CTGGTCGTTGGGTCATCAGGGGACCCAAAGTACATTGATCTACCAGCTGAAGACACAGAT 2432 || || | || | || || || ||||||||||||||||| ||||| || |||| Sbjct 243 CTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCAGAA 302 Query 2433 CGCATGTACATTGCAAAAGAAGGCTATTGTTACTTGAACATTTTTCTGGCTATGCTCGTT 2492 || ||||| || ||||| ||||| ||||| || | || ||||| || || ||||| || Sbjct 303 CGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTA 362 Query 2493 AATGTTAATGAGCAGGATGCAAAAGACTTCACAAAAATGGTCAGAGATGTGATTGTTCCG 2552 |||||||||||| | || ||||| || ||||| |||||| | | ||||| ||| ||| Sbjct 363 AATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGT-TTTGATCCC 421 Query 2553 C-GACTTGGGAAGTGGCCTTCGATGATGGATGTGGCAACAGCTGCGTACATTCTTACAGT 2611 | |||||| |||||||||| |||||||||| ||||| || || || ||||| || Sbjct 422 CATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGT 481 Query 2612 ATTTCATCCTGAAACGCGCAATGCTGAATTACCTAGAATTTTAGTAGATCATGCTGCTCA 2671 ||| |||||||||||||| ||||||||||| || || | || || || ||| | || Sbjct 482 ATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACA 541 Query 2672 AACAATGCATGTGATTGATTCATTTGGTTCCTTGACAGTTGGTTATCACATTTTGAAAGC 2731 ||| |||||||| |||||||| | ||| || | || ||||| |||||| | | || || Sbjct 542 AACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGGC 601 Query 2732 AGGGACCATTAATCAATTGATACAATTTGCATCAAATGATCT 2773 || || | ||||| || || |||||||| ||||||||||| Sbjct 602 CGGAACTGTCAATCATTTAATTCAATTTGCCTCAAATGATCT 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32018737310560