Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_008028.1 Length=9548 Score E Sequences producing significant alignments: (Bits) Value seq33068 127 1e-25 >seq33068 Length=655 Score = 127 bits (140), Expect = 1e-25 Identities = 269/398 (68%), Gaps = 5/398 (1%) Strand=Plus/Plus Query 1986 TTAAAATGCCAACGAAGAACCACCTTGTCGTGGGGAACTCTGGAGACCCAAAATACGTCG 2045 |||| | || ||||||| || || || | || ||||| || ||||| ||| | | Sbjct 220 TTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTG 279 Query 2046 ATCTACCGAGCGA-TGAGAGTG---GCATGTTCATTGCCAAAGAAGGATATTGTTATATG 2101 |||| || ||| |||| | | |||| || || || ||||| ||||| ||| | Sbjct 280 ATCTGCC-AGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTC 338 Query 2102 AACATTTTCCTTGCTATGTTGATAAATGTTAGTGAGAACGATGCGAAGGATTTCACTAAG 2161 || |||||||| || ||| | ||||||||| ||||||||| || ||||||||||| || Sbjct 339 AATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAA 398 Query 2162 ATGGTTCGGGATGTTATAGCAGAGAGACTCGGAAAGTGGCCTAGCATGCTTGACGTTGCA 2221 ||| |||| |||||| | | || || |||||||| || | || |||||| Sbjct 399 ATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCA 458 Query 2222 ACAGCTTGCTTTCTATTAACAGTATTCCATCCCGACACCAAGAATGCAGAACTTCCCAGA 2281 || || | | | || ||||||||||| || || || ||| | ||||| Sbjct 459 ACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGG 518 Query 2282 ATATTGGTCGATCATAAAACGAAAACCATGCATGTCATCGATTCATATGGATCGATGCAT 2341 || | || || || || |||||||||||||||| ||||| |||||||| | | Sbjct 519 ATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACT 578 Query 2342 ACAGGTTATCACATTCTCAAAGCCAATACAGTCAACCA 2379 || |||||| | ||||| ||| || ||||| || Sbjct 579 GTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCA 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30425797132672