Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_009741.1 Length=9804 Score E Sequences producing significant alignments: (Bits) Value seq33068 181 7e-42 >seq33068 Length=655 Score = 181 bits (200), Expect = 7e-42 Identities = 349/509 (69%), Gaps = 12/509 (2%) Strand=Plus/Plus Query 1963 AACGGGAATTTCATATACCCGTGCTGTTGCGTTACTGAAGATGATGGGAGACCATTATAC 2022 || || |||| ||| || | || || || || || |||||||| | || | ||| Sbjct 153 AATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTAC 212 Query 2023 TCACATTTGAAGAGCCCCACAAAAAGGCATTTGATGATAGGGGCATCTGGTGATCCAAAG 2082 || | | |||||||| || || |||||| | | ||||| || ||||||||||||||| Sbjct 213 TCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAG 272 Query 2083 ATAC-TCGATATGCCGTCAGCGGAACTTGACAAGATGTACATAGCTAAGCAAGGATATTG 2141 ||| | ||| |||| || | || || ||||| ||||| ||| |||| ||||| Sbjct 273 -TACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTG 331 Query 2142 TTATTTGAACATTTTCCTAGCGATGCTTGTGAATGTTAGTGAGGAAGAAGCTAAATTCTT 2201 ||| | || |||||||| || |||||||| ||||||| |||| | ||||| || || Sbjct 332 CTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTT 391 Query 2202 CACGAAGATGGTACGAGATGTTTTAATACCAAAACTTGGTGAATGGCCGACAATGCATGA 2261 ||| || ||| | || |||||||| || || | ||||| | ||||| || || || Sbjct 392 CACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGA 451 Query 2262 TGTAGCCACAGCTTGCTACATAGCTACAA----TTTTCTACCCAGATGTGAGTAACGCTG 2317 ||| || || ||| |||| | | | | ||| | || || | | ||||| Sbjct 452 TGTTGCAAC----TGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTG 507 Query 2318 AGTTACCAAGAATATTAGTGGACCACGCT-CAGAAGACAATGCATGTTATTGACTCGTTC 2376 | ||||| || || | || ||||||||| || || || |||||||| ||||| || | Sbjct 508 AATTACCCAGGATCCTTGTTGACCACGCTACACAA-ACCATGCATGTCATTGATTCTTAT 566 Query 2377 GGTTCACTTAGCACAGGGTACCACGTCCTAAAAGCTGGCACTGTCTCCCAGCTGATCGAT 2436 || ||||| | ||||| ||||| || || || || |||||| || | || | Sbjct 567 GGATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAA 626 Query 2437 TTTGCGTCTAATGATCTGGACAGTGAAAT 2465 ||||| || ||||||||| | || || || Sbjct 627 TTTGCCTCAAATGATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31244657947008