Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_009995.1 Length=9730 Score E Sequences producing significant alignments: (Bits) Value seq33068 122 5e-24 >seq33068 Length=655 Score = 122 bits (134), Expect = 5e-24 Identities = 317/478 (66%), Gaps = 4/478 (1%) Strand=Plus/Plus Query 2044 GGTAATTATGTTCACGTTTGCAGTTGTGTAACTCTAGATGATGGCAAACCTGTTG-AGAG 2102 || |||||| | ||| || | |||||||| | |||||||| || || | || | Sbjct 156 GGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGG-AACCCCGATGTACTC 214 Query 2103 TGAA-TTAACAACACCAACGAGAAATCATCTTGTCATTGGAAACACTGGTGATTCAAAAT 2161 || |||| | | || |||| | ||||| || || ||| |||||||| |||| | Sbjct 215 CGAGCTTAAGAGC-CCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGT 273 Query 2162 ACTTGGATCTTCCAACGCCTGAGAGCGAGTCATTATACATTGCAAAGAATGGATATTGTT 2221 || | ||||| ||| | ||||| || | || || |||||| | || ||||| | Sbjct 274 ACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCT 333 Query 2222 ACATGAATATTTTCTTGGCAATGCTTGTCAATATACCGGAAGGAGAGGCAAAGAGTTTCA 2281 | | ||||||||| | ||||||||||| ||| | || || |||||| ||||| Sbjct 334 ATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCA 393 Query 2282 CTAAGCTCGTGAGAGATGTAGTTGCAGACAAACTTGGAATGTGGCCCACAATGCGTGATG 2341 | || | | | ||||| | || ||||| |||||| || || |||| Sbjct 394 CCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATG 453 Query 2342 TTGCAACTGCAGCTTATTATTTAACCGTTTTCCACCCAGATGCAGCAAACGCAGAGCTTC 2401 ||||||||||||| ||| | || ||| ||||| || || | | ||| || | | Sbjct 454 TTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTAC 513 Query 2402 CAAGGATTCTGGTAGACCACGAAGCAAAAGTTATGCATGTGATTGACTCATTTGGATCTT 2461 | ||||| || || ||||||| || || |||||||| ||||| || | |||||| Sbjct 514 CCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCAC 573 Query 2462 TAAGCACAGGTTATCATATTCTCAAGGCTAATACTGTTAGTCAACTGATTCAATTTGC 2519 ||| || ||||| | |||||||| ||||| | ||| | ||||||||||| Sbjct 574 TAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGC 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31007955992864