Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_010736.1 Length=9842 Score E Sequences producing significant alignments: (Bits) Value seq33068 111 1e-20 >seq33068 Length=655 Score = 111 bits (122), Expect = 1e-20 Identities = 254/379 (67%), Gaps = 10/379 (3%) Strand=Plus/Plus Query 2289 CTGGGGATCCGAAATACGTGGACTTGCCAACAATTGAATCTGAATCACTATACATCGCAA 2348 |||| ||||| || ||| | || ||||| || ||| | ||| | || || |||| Sbjct 259 CTGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAA 318 Query 2349 AAGAAGGATACTGTTACATGAACATTTTCTTGGCGATGTTAGTCAATGTACCAGAGGGAG 2408 | ||||| || || || | || |||||| | || ||| | || ||||| ||| | Sbjct 319 AGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACG 378 Query 2409 AGGCAAAAGACTTCAC-AAAGCGAGTCAGAGATGTAGTAGCTGAT----AAACTTGGCAC 2463 | ||||| || ||||| ||| || || | ||||| | ||| | ||||| Sbjct 379 AAGCAAAGGATTTCACCAAAATGATTC-GTGATGTTTT----GATCCCCATGCTTGGGCA 433 Query 2464 TTGGCCAACCATGCGCGATGTTGCAACAGCCGCATATTATCTAACCATTTTCCATCCAGA 2523 ||||| | || ||||||||||| || |||||| |||| | | |||||||| || Sbjct 434 GTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGA 493 Query 2524 TACAGCAAGTGCTGAGCTGCCGCGCATTTTAGTTGACCACACGAGCAAGACAATGCATGT 2583 || | | ||||| | || | || | ||||||||| | | | || |||||||| Sbjct 494 AACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGT 553 Query 2584 GATTGACTCTTTTGGATCAATCAATACAGGCTATCACATATTGAAGGCAAACACCGTTAA 2643 ||||| |||| ||||||| | | | || |||||| | | ||||| || || || Sbjct 554 CATTGATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAA 613 Query 2644 TCAATTAATTCAATTTGCC 2662 ||| ||||||||||||||| Sbjct 614 TCATTTAATTCAATTTGCC 632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31366207599136