Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_010954.1 Length=9656 Score E Sequences producing significant alignments: (Bits) Value seq33068 385 3e-103 >seq33068 Length=655 Score = 385 bits (426), Expect = 3e-103 Identities = 470/638 (74%), Gaps = 10/638 (2%) Strand=Plus/Plus Query 1822 TCCCAATGGTCAGAGGAAGCTTGCGATAGGCTCGCTCATAGTTCCCCTGGATTTCGATAG 1881 ||| |||||| | ||| | || |||||||| | || || || || |||| ||||| Sbjct 23 TCCAAATGGTACTCGTAAGTTGGCCATAGGCTCATTGATTGTACCACTCAATTTGGATAG 82 Query 1882 AGCAAGAATTGCGTTGCAGGGAGAGAGCATCAA-AAGAGAGCCAATTACGTTGGCATGTG 1940 ||| | | ||| | | ||||||||||| | |||| ||||| | || | || |||| Sbjct 83 GGCACGCACTGCACTACTTGGAGAGAGCATTGAGAAGA-AGCCACTCACATCAGCGTGTG 141 Query 1941 TATCACGCCAGGACGGGAATTTCATATATCCGTGCTGCTGCGTTACACAAGACGATGGCA 2000 | || | ||| | || |||| ||| | | || ||||| || || || ||||| | Sbjct 142 TCTCCCAACAGAATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAA 201 Query 2001 AGGCACTATATTCAGATCTGAAGAGTCCGACAAAAAGGCATCTGGTGGTAGGGGCATCTG 2060 | | || || || || ||||| ||||| || |||||||| || |||| || |||| Sbjct 202 CCCCGATGTACTCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTG 261 Query 2061 GGGATCCAAAATACATTGATCTACCAGC----GACGGACAACGATAAAATGTATATAGCA 2116 | |||||||| ||||||||||| ||||| || | | |||| |||||||||||| Sbjct 262 GTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCAGAACGT----ATGTATATAGCA 317 Query 2117 AAGCAAGGGTACTGCTATCTCAATATATTTTTAGCAATGCTTGTGAATGTAAATGAAAGT 2176 ||| |||| || |||||||||||||| || | ||||||||||| ||||| ||||| | Sbjct 318 AAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAAC 377 Query 2177 GATGCTAAGGATTTTACGAAAATGGTACGTGATGTGATTGTGCCAAGACTCGGGGAGTGG 2236 || || |||||||| || |||||| | |||||||| | | || | || ||| ||||| Sbjct 378 GAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGG 437 Query 2237 CCAACAATGATGGATGTTGCAACAGCAGCATATATGCTTACAGTTTTTCATCCGGAAACG 2296 || || |||||||||||||||| ||||||||||| || || || ||||| |||||| Sbjct 438 CCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACG 497 Query 2297 AGAAATGCAGAGCTACCAAGGATATTAGTGGATCATGCTTGTCAAACAATGCATGTGGTT 2356 || || || |||| ||||| | || || || ||| ||||| |||||||| || Sbjct 498 CGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATT 557 Query 2357 GATTCGTTTGGTTCATTAACAGTTGGGTATCACATTCTCAAAGCCGGCACTGTCAATCAG 2416 ||||| | ||| ||| |||| |||||||||||| | ||||| ||||| ||||||||||| Sbjct 558 GATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCAT 617 Query 2417 CTAATTCAATTTGCATCAAACGACTTGCAGAGCGAGAT 2454 ||||||||||||| ||||| || |||| |||||||| Sbjct 618 TTAATTCAATTTGCCTCAAATGATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30771254038720