Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014325.1 Length=9741 Score E Sequences producing significant alignments: (Bits) Value seq33068 87.8 1e-13 >seq33068 Length=655 Score = 87.8 bits (96), Expect = 1e-13 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 1919 CCAACGAAAAAGCACATGGTTGTCGGGAATTCTGGGGATTCAAAGTATGTGGACATGCCT 1978 || ||||| | ||| | ||| | || |||||| ||| ||||||| | || |||| Sbjct 228 CCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCA 287 Query 1979 AAAGGAGAGTCAGAATTACTTTACATGGCTAAGGATGGATATTGCTATCTGAACATATAT 2038 | ||| ||||| | || || || ||||| || ||||||||||| || || | Sbjct 288 GCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTC 347 Query 2039 CTCGCCATGTTGGTTAATATCAAAGAAGAAGAAGCAAAGGATTTCACAAAGAGAATTCGA 2098 ||||| ||| | || ||| | || || | ||||||||||||||||| || | ||||| Sbjct 348 CTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGT 407 Query 2099 GATTCGTATATACCAAAACTTGGAATGTGGCCAACATTATTGGATCTAGCCAC 2151 ||| | || || | ||||| |||||| |||| ||||| | || || Sbjct 408 GATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAAC 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31043141418480