Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014327.1 Length=9745 Score E Sequences producing significant alignments: (Bits) Value seq33068 131 1e-26 >seq33068 Length=655 Score = 131 bits (144), Expect = 1e-26 Identities = 307/454 (68%), Gaps = 12/454 (3%) Strand=Plus/Plus Query 1930 ATGGAAACTTTCTTTACCCTTGTTGCTGCACAACACTGGATGATGGAAGTGCAATTGAGT 1989 ||||||| | | | || | |||||||| ||| |||||||||||| | || | | Sbjct 154 ATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACT 213 Query 1990 CAACACTCTATGCGCCA-ACCAAGAAGCATCTTGTGATAGGGAACTCTGGCGATGCTAAA 2048 | || || | ||| || |||| |||||| || ||||| ||||| ||| | || Sbjct 214 CCGAGCT-TAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAG 272 Query 2049 TATGTTGATTTGCCTAAAGGAGAGTCTGAAATGTTGTATGTTGCTCGCGAAGGCTATTGT 2108 || ||||| |||| | ||| | ||| ||||| | || ||||| ||||| Sbjct 273 TACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGC 332 Query 2109 TACATCAACGTTTATTTAGCAATGCTTGTAAATGTGAAAGAGGATGAAGCAAAAGACTTC 2168 || |||| ||| | ||||||||||||||||| || ||| | |||||||| || ||| Sbjct 333 TATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTC 392 Query 2169 ACAAAGAAAGTGCGTGATCTATGTGTGCCCAGGCTTGGGAAGTGGCCAACTCTAATGGAC 2228 || || | | |||||| | | | |||| ||||||| ||||||| | | ||||| Sbjct 393 ACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGAT 452 Query 2229 TTAGCCACGACATGCGCACAACTTC---GAATTTTCTTCCCAGACGTGC-ATGACGCTGA 2284 | || || || ||| | ||| | | ||| || || || ||| |||||| Sbjct 453 GTTGCAACTGCA---GCATATATTCTAGGCGTATTCCATCCTGAAACGCGATG-CGCTGA 508 Query 2285 ATTGCCACGCATACTTGTTGACCACAACAATCAAA-CATGCCACGTCGTGGATTCGTATG 2343 ||| || | || |||||||||||| | |||| |||| || ||| | ||||| |||| Sbjct 509 ATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATG-CATGTCATTGATTCTTATG 567 Query 2344 GATCCATAACAACTGGGTATCACATACTGAAGGC 2377 |||| |||| |||||||||| | || ||||| Sbjct 568 GATCACTAACTGTTGGGTATCACGTGCTCAAGGC 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31055936118704