Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014742.1 Length=10820 Score E Sequences producing significant alignments: (Bits) Value seq33068 141 6e-30 >seq33068 Length=655 Score = 141 bits (156), Expect = 6e-30 Identities = 288/423 (68%), Gaps = 10/423 (2%) Strand=Plus/Plus Query 2967 ATGGAAATTTCATTTATCCGTGCTGTTGTGTTACTTATGATGATGGACAACCTATGGAGT 3026 ||||||||| || | | || || ||||| || ||||||||| || ||| | | Sbjct 154 ATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACT 213 Query 3027 CTGAATTTAAATTGCCAACTAAGAATCATCTTGTCATTGGTAACTCTGGGGACCCGAAAT 3086 | || |||| || || |||| ||||| || || || ||||| || || || | Sbjct 214 CCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGT 273 Query 3087 ACGTTGATATGCCTCCAGAAATTAGCAAGAAA--ATGTACATCGCTAAGGAAGGATATTG 3144 || ||||| |||| || | || |||| ||||| || || |||||||| ||||| Sbjct 274 ACATTGATCTGCCAGCATC--TGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTG 331 Query 3145 TTACATCAATATATTTCTCGCTATGCTCGTTAATGTTAATGAGGCAGAAGCAAAAGACTT 3204 || ||||||| || ||||| ||||| || |||||||||||| |||||||| || || Sbjct 332 CTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTT 391 Query 3205 CACTAAACAAGTTCGTGACGTCCTTATGGAGAAGCTTGGAAAATGGC---CAACGATGTT 3261 ||| ||| ||||||| || | || | |||||| | |||| || |||| Sbjct 392 CACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGA 451 Query 3262 TGATGTAGCTACAGCATGTGCTTTCATGTCCGTATTTTATCCAGAGACGCGCAATGCAGA 3321 || || | || |||||| | ||| | |||||| |||| || ||||| || || Sbjct 452 TGTTGCAACTGCAGCATAT--ATTC-TAGGCGTATTCCATCCTGAAACGCGATGCGCTGA 508 Query 3322 GTTGCCAAGAATTTTGGTCGACCACACTACTAAGACCATGCACGTGATTGATTCATTTGG 3381 || || || || | || |||||| |||| | |||||||| || |||||||| | ||| Sbjct 509 ATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGG 568 Query 3382 TTC 3384 || Sbjct 569 ATC 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34494511803904