Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014790.2 Length=9682 Score E Sequences producing significant alignments: (Bits) Value seq33068 228 5e-56 >seq33068 Length=655 Score = 228 bits (252), Expect = 5e-56 Identities = 340/485 (70%), Gaps = 2/485 (0%) Strand=Plus/Plus Query 1990 CATGTTGCTGTGTGACACAAGATGATGGGACTCCCTTTTACTCAGATCTTAAGAGTCCTA 2049 ||||||||||||| || |||||||| || || | ||||| || |||||||| || | Sbjct 172 CATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGA 231 Query 2050 CCAAAAGACACTTGGTTGTTGGGACATCAGGTGAACCAAAATACATTGATTTACCAGCAA 2109 | || || || | ||| | || | || ||||| ||||| ||||||||| | |||||| Sbjct 232 CGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCAT 291 Query 2110 CTGATGCAGAAAAGATGTACATAGCCAAAGAGGGTTATTGCTATTTGAACATCTTCCTCG 2169 |||| |||||| ||||| ||||| || || |||||||||||| | || || ||||||| Sbjct 292 CTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCG 351 Query 2170 CAATGCTAGTGAATNNNNNNNNNNNNNNNGCCAAAGATTTCACCAAGATGGTCAGGGACA 2229 ||||||| || ||| || || ||||||||||| ||| | | || Sbjct 352 CAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATG 411 Query 2230 CAATCATTCCACTG-TTGGGTACATGGCCAACAATGTTAGACCTAGCTACAGCAGTGTAC 2288 | || || || ||||| | ||||| || || | || | || || |||| || Sbjct 412 TTTTGATCCCCATGCTTGGGCA-GTGGCCTTCATTGATGGATGTTGCAACTGCAGCATAT 470 Query 2289 ATGCTCACAATTTTCCATCCTGAAGCTAGAAATGCTGAATTGCCTCGCATTTTAGTGGAC 2348 || || | |||||||||||| | || |||||||| || | || | || ||| Sbjct 471 ATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGAC 530 Query 2349 CACGCAAGCCAGACAATGCATGTCATCGATTCTTTTGGATCACTCACAACTGGGTATCAT 2408 ||||| | || || ||||||||||| ||||||| ||||||||| || ||||||||| Sbjct 531 CACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCAC 590 Query 2409 GTACTGAAAGCAGGTACAGTGAACCAATTGATATCATTTGCATCTGATGATCTTCAAGGA 2468 || || || || || || || || || || || |||||| || ||||||| ||| | Sbjct 591 GTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGCCTCAAATGATCTGCAAAGC 650 Query 2469 GAGAT 2473 ||||| Sbjct 651 GAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30854419590176