Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014898.1 Length=10113 Score E Sequences producing significant alignments: (Bits) Value seq33068 95.1 8e-16 >seq33068 Length=655 Score = 95.1 bits (104), Expect = 8e-16 Identities = 316/484 (65%), Gaps = 12/484 (2%) Strand=Plus/Plus Query 2370 ATGAAAATTTCATATATCCATGTTGCTGCGTAACTTTAGATGATGGAACACCAGTTGAGT 2429 ||| ||||| ||| | |||||||||| ||||| | ||||||||||| || | | | Sbjct 154 ATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACT 213 Query 2430 CAGTTGTTAAACCACCCACAAAGAATCACTTAGTCATTGGTAATTCAGGGGACTCAAAGT 2489 | | |||| || || |||| || |||| || || ||| || || |||||| Sbjct 214 CCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGT 273 Query 2490 TTGTGGATCTACCAACAGACATTAGCACTCAAC---TCTACATTGCAAAAGAAGGATATT 2546 | ||||| ||| || | || | ||| | || || ||||| ||||| |||| Sbjct 274 ACATTGATCTGCCAGCATC--TGAGG-CAGAACGTATGTATATAGCAAAGGAAGGTTATT 330 Query 2547 GTTATGTGAACATATTTCTAGCAATGCTTGTGAACATCAATGAAGAGGATGCGAAAGAGT 2606 | ||| | || || || || ||||||||||| || | ||||| | || || || || | Sbjct 331 GCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATT 390 Query 2607 TCACAAAAATGGTAAGGGATGTAGTTATATCGCAAT--TAGGAACTTGGCCAATGTTAAC 2664 |||| |||||| | | ||||| || ||| | || | || ||||| || | Sbjct 391 TCACCAAAATGATTCGTGATGT--TTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGAT 448 Query 2665 AGATATAGCTGCTATGTGCTTTCTTGTCAGCATATTCTTCCCAGATGTGCAAAGTGCTGA 2724 ||| | || || | | || | || ||||| || || || | | ||||| Sbjct 449 GGATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGA 508 Query 2725 ACTTCCAAGAATACTAGTTGACCACAC-ACATCAGGCAATGCATGTAATAGACTCATATG 2783 | | || || || || ||||||||| | ||| || | |||||||| || || || |||| Sbjct 509 ATTACCCAGGATCCTTGTTGACCACGCTACA-CAAACCATGCATGTCATTGATTCTTATG 567 Query 2784 GATCATTAACAACTGGATACCACATATTGAAGGCAAACACAGTGAATCAGCTTATACAAT 2843 ||||| |||| ||| || ||| | | ||||| || || ||||| | || |||| Sbjct 568 GATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAAT 627 Query 2844 TCGC 2847 | || Sbjct 628 TTGC 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32233048539312