Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_014905.1 Length=9917 Score E Sequences producing significant alignments: (Bits) Value seq33068 149 4e-32 >seq33068 Length=655 Score = 149 bits (164), Expect = 4e-32 Identities = 233/330 (71%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 2349 ATGTACATTGCGAAGGAGGGTTATTGCTATGTTAACATTTTCTTAGCAATGTTAGTCAAC 2408 ||||| || || ||||| |||||||||||| | || |||||| | |||||| | || || Sbjct 306 ATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAAT 365 Query 2409 GTAAATGAAGAAAG-TGCGAAGGACTTCACAAAGATGGTGCGAGATATGGTAATAGAGAA 2467 || |||| |||| | || ||||| ||||| || ||| | || ||| | | || Sbjct 366 GTTAATG-AGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGAT---CCC 421 Query 2468 TAGACTTGGAAAATGGCCAACGTTAATGGATGTTGCGACTGCTTGTCATCTGTTAACAGT 2527 | ||||| | ||||| | || ||||||||||| ||||| || | || || Sbjct 422 CATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGT 481 Query 2528 CTTCCATCCAGAGACTAGTAATGCTGAGTTACCACGGATACTAGTTGACCACAATACAAA 2587 |||||||| || || | ||||| ||||| |||| || ||||||||| |||| | Sbjct 482 ATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACA 541 Query 2588 AACGATGCATGTTATTGATTCATATGGATCAAAAACAACCGGCTATCACGTGTTGAAGGC 2647 ||| |||||||| |||||||| ||||||||| ||| || ||||||||| | ||||| Sbjct 542 AACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGGC 601 Query 2648 AAACACAGTTTCTCAGCTAATTAAATTTGC 2677 || || ||| ||||| ||||||| Sbjct 602 CGGAACTGTCAATCATTTAATTCAATTTGC 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31606108228336