Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_015393.1 Length=9999 Score E Sequences producing significant alignments: (Bits) Value seq33068 143 2e-30 >seq33068 Length=655 Score = 143 bits (158), Expect = 2e-30 Identities = 200/274 (73%), Gaps = 11/274 (4%) Strand=Plus/Plus Query 2391 ATGTACATAGCTAAAGAAGGGTATTGCTATGTCAATATATTTCTAGCCATGCTAGTGAAT 2450 ||||| ||||| || ||||| ||||||||| ||||||| || || || ||||| || ||| Sbjct 306 ATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAAT 365 Query 2451 GTGAATGAGGATAGTGCGAAGGATTTCACAAAGATGGTGCGAGATATGGTTATTGAAAAC 2510 || |||||| | || ||||||||||| || ||| | || ||| ||| |||| | Sbjct 366 GTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGAT---GTT-TTGATCCC 421 Query 2511 AA--GTTAGGCACATGGCCTAGTTTAATGGACGTGGCAACAGCGTGTCACTTACTTACTG 2568 | || |||| |||||| || ||||| || ||||| || | | || | Sbjct 422 CATGCTTGGGCA-GTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCG 480 Query 2569 TATTCCATCCAGAAACAAGCAAT--GCTGAATTACCAAGGATTCTAGTTGACCACAAGAC 2626 |||||||||| ||||| || || ||||||||||| ||||| || ||||||||| || Sbjct 481 TATTCCATCCTGAAAC--GCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTAC 538 Query 2627 TAAAACCATGCATGTTGTTGATTCCTATGGTTCA 2660 ||||||||||||| ||||||| ||||| ||| Sbjct 539 ACAAACCATGCATGTCATTGATTCTTATGGATCA 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31868399582928