Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_016044.1 Length=9595 Score E Sequences producing significant alignments: (Bits) Value seq33068 95.1 7e-16 >seq33068 Length=655 Score = 95.1 bits (104), Expect = 7e-16 Identities = 285/431 (66%), Gaps = 12/431 (3%) Strand=Plus/Plus Query 1939 ATATACCCGTGCTGCTGTGTCACTTTAGAAGATGGGACACCAGAGTATTCTGAATTCAAG 1998 ||| || | || |||||||| || | || ||||| || || ||| || || | ||| Sbjct 165 ATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAG 224 Query 1999 GCACCGACCAAAAACCACATTGTACTTGGAAATTCTGGAGATTCAAAGTATTTGGACATG 2058 ||||| || | || | || | ||| |||||| ||| ||||||| | || || Sbjct 225 AGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTG 284 Query 2059 CCTGCAGACATTAGCGAAAACCT--GTATATAGCGAAAGAGGGTTATTGCTACATAAATA 2116 || ||| | || | ||| | ||||||||| || || ||||||||||| | |||| Sbjct 285 CCAGCATC--TGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATA 342 Query 2117 TCTTCTTGGCCATGTTGGTGAATGTGGATGAGAAAGACGCCAAAGACTACACGAAGTGGG 2176 | ||| | || ||| | || ||||| ||||||| || || || || | ||| || | Sbjct 343 TTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGA 402 Query 2177 TAAGAGATGTTGTTTCTGAGCA-GCTTGGGCAATGGCCAACTATGTTGGATATCGCACTT 2235 | | |||||| || | || ||||||||| ||||| | || ||||| | ||| | Sbjct 403 TTCGTGATGTT-TTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACT 461 Query 2236 GCATGCTACCAATTGTCAGTCTTGTTTCCTTCAGTTAAG---TCAGCAGAGCTCCCACGT 2292 ||| || | ||| | || | | || | | | | | | | || || | || | Sbjct 462 GCA-GC-ATATATTCT-AGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGG 518 Query 2293 ATACTGGTTGACCACAAAACCCAGACAATGCATGTGATTGATTCATTTGGATCTGCAACC 2352 || || ||||||||| || || || |||||||| |||||||| | |||||| ||| Sbjct 519 ATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACT 578 Query 2353 ACGGGGTATCA 2363 |||||||| Sbjct 579 GTTGGGTATCA 589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30576134860304