Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_016159.1 Length=9626 Score E Sequences producing significant alignments: (Bits) Value seq33068 185 5e-43 >seq33068 Length=655 Score = 185 bits (204), Expect = 5e-43 Identities = 317/450 (70%), Gaps = 10/450 (2%) Strand=Plus/Plus Query 1937 TACATACATGTTGCTGTGTTACAGATG-ATGTTGGGAATCCTGTATTCTCAACCCTCAAA 1995 |||| ||||||||||||| || |||| ||| ||| | || | | ||| || || Sbjct 166 TACACTCATGTTGCTGTGTAAC-GATGGATGATGGAACCCCGATGTACTCCGAGCTTAAG 224 Query 1996 AGTCCAACCAAAAGTCATCTCGTTATAGGAAACACTGGTGATCCGAAATACGTTGATTTG 2055 || || || || || ||||| ||||||||| |||||||||| || ||| ||||| || Sbjct 225 AGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTG 284 Query 2056 CCAGCATTCGACGAGTTGAAG--ATGTACATAGCAAAGGAGGGGTATTGTTACTTAAATA 2113 ||||||| || | ||| ||||| ||||||||||| || ||||| || | |||| Sbjct 285 CCAGCATCTGAGGCA--GAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATA 342 Query 2114 TTTTCCTCGCCATGCTCGTTAACGTTCACGAAGAAAG-TGCGAAGGATTTCACAAAAATT 2172 |||||||||| ||||| || || ||| | | |||| | || ||||||||||| ||||| Sbjct 343 TTTTCCTCGCAATGCTTGTAAATGTTAATG-AGAACGAAGCAAAGGATTTCACCAAAATG 401 Query 2173 GTACGGGATACAATTATACCGATGCTAGGTACATGGCCGACAATGCATGATCTAGCAACA 2232 | || ||| | || || ||||| || ||||| || || ||| | ||||| Sbjct 402 ATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACT 461 Query 2233 GCGTGTTACA-TCTTGACTGTTTTTCACCCGGAGACGAGAAACGCAGAATTGCCTCGAAT 2291 || || | ||| | | || || || || || ||| || ||| ||||| || | || Sbjct 462 GCAGCATATATTCTAGGC-GTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGAT 520 Query 2292 CCTAGTTGACCATGAAGCACAAATAATGCATGTTATTGATTCATATGGCTCACTCAGCAC 2351 ||| |||||||| | |||||| |||||||| |||||||| ||||| ||||| | Sbjct 521 CCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGT 580 Query 2352 AGGCTACCATGTCCTTAAAGCCGGCACAGT 2381 || || || || || || ||||| || || Sbjct 581 TGGGTATCACGTGCTCAAGGCCGGAACTGT 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30675293787040