Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_016441.1 Length=9649 Score E Sequences producing significant alignments: (Bits) Value seq33068 309 2e-80 >seq33068 Length=655 Score = 309 bits (342), Expect = 2e-80 Identities = 360/483 (75%), Gaps = 2/483 (0%) Strand=Plus/Plus Query 1924 CAGAATGGCAACTTTGTGTACCCATGTTGTTGTGTGACACTTGATGATGGAACACCATTG 1983 |||||||| || | | | || ||||||| ||||| || | ||||||||||| || || Sbjct 150 CAGAATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATG 209 Query 1984 TATTCTGATCTTAAGAGCCCGACCAAGAGACACTTAGTTGTGGGAACATCTGGTGAGCCC 2043 || || || |||||||||||||| ||||| || ||||| | ||| | |||||||| || Sbjct 210 TACTCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCA 269 Query 2044 AAATATATTGATCTTCCTCAAACAGATGAGGAAAGGATGTACATAGCAAAGGAAGGTTAC 2103 || || |||||||| || | | || | ||| | ||||| ||||||||||||||||| Sbjct 270 AAGTACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTAT 329 Query 2104 TGCTACCTCAACATCTTTCTAGCAATGCTAGTCAATGTAAATGAAAAGGAAGCCAAGGAT 2163 ||||| ||||| || || || |||||||| || ||||| ||||| || ||||| |||||| Sbjct 330 TGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGAT 389 Query 2164 TTCACAAAGATGGTGAGAGATGTGGTCATACCAATG-TTGGGAACATGGCCGACAATGCA 2222 ||||| || ||| | | ||||| | || || ||| ||||| | ||||| || || Sbjct 390 TTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCA-GTGGCCTTCATTGAT 448 Query 2223 GGATCTTGCAACAGCTGTATATATTCTTACAGTTTTCCACCCTGAAACGAGGAATGCAGA 2282 |||| ||||||| || | ||||||||| || ||||| ||||||||| | || || Sbjct 449 GGATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGA 508 Query 2283 GTTACCTCGTATATTGGTCGACCATGCAAGTCAAACCATGCATGTTATAGACTCGTTTGG 2342 ||||| | || | || ||||| || | |||||||||||||| || || || | ||| Sbjct 509 ATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGG 568 Query 2343 CTCACTGACAACTGGTTATCACGTGCTCAAAGCGGGAACAATTAACCAGTTGATCCATTT 2402 ||||| || ||| |||||||||||||| || ||||| | || || || || || || Sbjct 569 ATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATT 628 Query 2403 TGC 2405 ||| Sbjct 629 TGC 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30748863313328