Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019409.1 Length=9445 Score E Sequences producing significant alignments: (Bits) Value seq33068 156 3e-34 >seq33068 Length=655 Score = 156 bits (172), Expect = 3e-34 Identities = 326/485 (67%), Gaps = 3/485 (1%) Strand=Plus/Plus Query 1789 TGTTGTTGCGCAACGTTGGATGATGGTAAGCCAGTGCTATCGGACTTGAAAATTCCCACG 1848 ||||| || | |||| |||||||||| | || || || || | || | || ||| Sbjct 174 TGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGACG 233 Query 1849 AAGAATCATTTGGTGATCGGGAATACAGGAGATGCAAAGTACGTCGACTTACCAACAAAT 1908 |||| ||| | || || || | | || ||| |||||||| | || | ||| || | Sbjct 234 AAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATCT 293 Query 1909 GATGATGAGCATTTGTATATATCGAAGGACGGTTATTGTTATGTAAATATATTTCTAGCT 1968 || | || | | |||||||| | ||||| |||||||| ||| | ||||| || || || Sbjct 294 GAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCA 353 Query 1969 ATGTTGGTGAATATCAGTGAAAAGGACGCGAAGGAATTTACAAAGACAATGGTGCGAGAT 2028 ||| | || ||| | | ||| || || || ||||| || || || |||| | || ||| Sbjct 354 ATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAA---AATGATTCGTGAT 410 Query 2029 CTTGTAGTACCAAAACTTGGCAAATGGCCGAAACTGATTGATGTAGCAACGGCATGCCAT 2088 || | | || | ||||| | ||||| | |||| ||||| ||||| ||| || Sbjct 411 GTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATAT 470 Query 2089 CTTCTTAGCGTTTTCTTTCCTGACACACGAAATGCAGAACTTCCGCGAATCCTTGTTGAT 2148 |||| |||| ||| |||||| || ||| || ||| | || | ||||||||||| Sbjct 471 ATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGAC 530 Query 2149 CACACGAATAAAACAATGCATGTGGTGGACTCGTATGGCTCCCTCACAACCGGATATCAT 2208 ||| | | |||| |||||||| | || || ||||| || || || || ||||| Sbjct 531 CACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCAC 590 Query 2209 GTGTTAAAAGCTACTACGGTCAACCAACTCATTGGTTTTGCTAGTGACGAACTGCAAAGC 2268 ||| | || || || ||||| || | ||| ||||| | || ||||||||| Sbjct 591 GTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGCCTCAAATGATCTGCAAAGC 650 Query 2269 GAAAT 2273 || || Sbjct 651 GAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30096333601904