Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019412.1 Length=9538 Score E Sequences producing significant alignments: (Bits) Value seq33068 125 4e-25 >seq33068 Length=655 Score = 125 bits (138), Expect = 4e-25 Identities = 401/605 (66%), Gaps = 24/605 (4%) Strand=Plus/Plus Query 1836 AAGTTGGCAATTGGAAATTTGATTTTATCAACAAGTTTCGATGTGCTACGCACTCAACTT 1895 |||||||| || || |||||| || || | ||| ||| | ||||||| ||| Sbjct 39 AAGTTGGCCATAGGCTCATTGATTGTACCACTCAATTTGGATAGGGCACGCACTGCACTA 98 Query 1896 GAAGGTGAAAGCATTGA-ACGACTTCCAGTCACAATTCAATGTGT---TAGCAAGCGACA 1951 || || |||||||| | || ||| ||||| ||| |||| | ||| || | Sbjct 99 CTTGGAGAGAGCATTGAGAAGAAG-CCACTCACA--TCAGCGTGTGTCTCCCAACAGA-A 154 Query 1952 TGAATCATTTGTATACCCT--TGCTGTTGTGTGACTTATGATGATGGAACTCCAGTGTAT 2009 || | | || ||||| || || || ||||| || ||||||||||| || |||| Sbjct 155 TGGA--AATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTAC 212 Query 2010 TCAACGGTCAAAACACCAACGCGAAACCATCTAGTAATTGGAACAACAGGAGACTCGAAA 2069 || | | || | || ||| | |||||||| || ||| | | || || | || Sbjct 213 TCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAG 272 Query 2070 TATCTTGACTTGCCAACAGAAATAAGTGAGAA-GT-TGTACATAGCAAAGGAAGGTTATT 2127 || |||| ||||| || | || |||| || |||| ||||||||||||||||||| Sbjct 273 TACATTGATCTGCCAGCATC--TGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATT 330 Query 2128 GTTATATAAACATATTTCTTGCTATGTTAGTTGAAGTTGATGAAGACGAAGCCAAAGATT 2187 | ||| | || || || || || ||| | || | ||| |||| ||||||| || |||| Sbjct 331 GCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATT 390 Query 2188 ACACGAAATGGGTGCGTGATGTTGTAGCAACTCA-GTTGGGCCAATGGCCAACAATGTCA 2246 ||| ||| | | ||||||||| | | | || | | || || ||||| || || Sbjct 391 TCACCAAAATGATTCGTGATGTT-TTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATG 449 Query 2247 GATATAGC-ACT--AGCATGTTACCAATTATCTGTTTTGTTCCCTTCGACACGATGTGCA 2303 ||| | || ||| ||||| | | || || || ||| || ||||| || Sbjct 450 GATGTTGCAACTGCAGCATATATTC---TAGGCGTATTCCATCCTGAAACGCGATGCGCT 506 Query 2304 GAGCTACCACGCATACTTGTTGATCATGCGACGAAAACGATGCATGTCATTGATTCTTAT 2363 || |||| | || |||||||| || || || |||| ||||||||||||||||||||| Sbjct 507 GAATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTAT 566 Query 2364 GGGTCTTTGACAACTGGATATCATATTCTGAAGGCACAAACAGTTAGCCAGTTAATCGAT 2423 || || | || ||| ||||| | || ||||| ||| || | || ||||| | Sbjct 567 GGATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAA 626 Query 2424 TTTGC 2428 ||||| Sbjct 627 TTTGC 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30393810382112