Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019415.1 Length=9842 Score E Sequences producing significant alignments: (Bits) Value seq33068 313 2e-81 >seq33068 Length=655 Score = 313 bits (346), Expect = 2e-81 Identities = 422/585 (72%), Gaps = 2/585 (0%) Strand=Plus/Plus Query 1979 AATTTGGATCGAGCACGTATTGCACTTCAAGGGAAGAGTGTGAAGAGAGAA-CCACTCAC 2037 ||||||||| | ||||| | |||||| | || |||| | ||| |||| |||||||| Sbjct 72 AATTTGGATAGGGCACGCACTGCACTACTTGGAGAGAGCATTGAGA-AGAAGCCACTCAC 130 Query 2038 ACTTGCATGCACATCAAAACAGGATGGGAACTTCGTATACACGTGCTGTTGTGTAACACA 2097 | || || || ||||| |||| || | || || | || || |||||||| Sbjct 131 ATCAGCGTGTGTCTCCCAACAGAATGGAAATTATATACACTCATGTTGCTGTGTAACGAT 190 Query 2098 GGATGATGGCAAACCAGTATATTCTGAACTCAAAAGTCCAACGAAGAGACACCTGGTGGT 2157 ||||||||| | || | || || || || || || || |||||||| || || || | Sbjct 191 GGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTAT 250 Query 2158 TGGCACATCAGGAGAACCTAAGTATATTGATTTGCCAGCAGTGGATGCTGAGAAAATGTA 2217 || | || || || || ||||| |||||| |||||||| || || || ||||| Sbjct 251 AGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTA 310 Query 2218 CATTGCAAGGGAAGGATATTGTTACCTGAACATTTTCTTAGCAATGCTTGTAAATGTCAA 2277 || |||| |||||| ||||| || || || |||||| | ||||||||||||||||| || Sbjct 311 TATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAA 370 Query 2278 TGAAGAAGAGGCCAAAGATTTTACAAAAATGGTACGTGATGTGATCATTCCCATGCTTGG 2337 ||| | || || || ||||| || |||||| | |||||||| | || ||||||||||| Sbjct 371 TGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGG 430 Query 2338 TCAGTGGCCCACCATGATGGATCTGGCAACTGCGGTGTATATGTTGACAATTTTTCACCC 2397 |||||||| | |||||||| | |||||||| | ||||| | | || || || Sbjct 431 GCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCC 490 Query 2398 AGAAACACGCAATGCTGAGCTACCTAGAATCTTGGTGGATCATGCAAGCCAAACCATGCA 2457 ||||| || ||||| |||| || ||| | || || || || | ||||||||||| Sbjct 491 TGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCA 550 Query 2458 TGTCATTGACTCTTTTGGATCGCTTACAGTTGGATATCATGTTCTGAAAGCAGGCACAAT 2517 ||||||||| |||| |||||| || || ||||| ||||| || || || || || || | Sbjct 551 TGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACTGT 610 Query 2518 CAATCAGTTGATACAGTTTGCTTCTGATGATCTTCAAGGAGAGAT 2562 |||||| || || || ||||| || ||||||| ||| | ||||| Sbjct 611 CAATCATTTAATTCAATTTGCCTCAAATGATCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31366207599136