Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020072.1 Length=9621 Score E Sequences producing significant alignments: (Bits) Value seq33068 161 6e-36 >seq33068 Length=655 Score = 161 bits (178), Expect = 6e-36 Identities = 302/439 (69%), Gaps = 6/439 (1%) Strand=Plus/Plus Query 1953 TATACTCATGTTGCTGTGTAACTTTAGATGATGGCAAACCATTGCTATCTGATTTGAAGA 2012 || ||||||||||||||||||| | |||||||| | || || || || | |||| Sbjct 166 TACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGA 225 Query 2013 CTCCAACCAAGAAGCATCTTGTGGTTGGTAATTCTGGTGATGCAAAATTTATAGATCTTC 2072 || || |||| |||||| || | || |||||||||| |||| | || ||||| | Sbjct 226 GCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGC 285 Query 2073 CTAAGGAAATTAGT--GAAGGGATGTACATTGTGAAGGAAGGATATTGCTATCTTAATAT 2130 | || | | || ||| | ||||| || | |||||||| ||||||||||| ||||| Sbjct 286 C--AGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATAT 343 Query 2131 TTTTCTAGCTATGCTAGTGAATGTTAATGAAAATGATGCAAAGGACTTCACGAAGTTTGT 2190 ||| || || ||||| || ||||||||||| || || |||||||| ||||| || | | Sbjct 344 TTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGAT 403 Query 2191 AAGAGACACTCTTGTGCCAAAACTTGGAAAGTGGCCAAAAATGATAGATGTGGCAACTGC 2250 | || | | | || | ||||| ||||||| | |||| ||||| |||||||| Sbjct 404 TCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGC 463 Query 2251 TTGTTACATGCTCAAAGTGCTGTATCCTGATGTTCATAATGCTGAATTACCACGCATTCT 2310 || || || || | ||||||| | ||||||||||| | || || Sbjct 464 AGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCT 523 Query 2311 AGTGGATCATG-AGCACAAAACCATGCATGTTTTAGATTCCTACGGATCTTTAACAACAG 2369 || || || | ||| ||||||||||||| | ||||| || ||||| |||| | Sbjct 524 TGTTGACCACGCTACAC-AAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTG 582 Query 2370 GATACCATGTTCTGAAGGC 2388 | || || || || ||||| Sbjct 583 GGTATCACGTGCTCAAGGC 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30659300411760