Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020105.1 Length=9796 Score E Sequences producing significant alignments: (Bits) Value seq33068 100 2e-17 >seq33068 Length=655 Score = 100 bits (110), Expect = 2e-17 Identities = 191/273 (70%), Gaps = 14/273 (5%) Strand=Plus/Plus Query 2074 TGTATATAGCAAAAGATGGTTATTGCTATATAAACATTTATTTAGCCATGCTAATAAATG 2133 ||||||||||||| || |||||||||||| | || |||| | || ||||| |||||| Sbjct 307 TGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATG 366 Query 2134 TTAGAGAGGAAGAGGCCAAAGACTTCACCAAGAAAGTCAGAGACATATTCATCCCTAAAT 2193 ||| ||| | || || || || |||||||| | | | || | || ||||| | Sbjct 367 TTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATGC 426 Query 2194 TAGGGAAATGGCCTACAGTGATGGATCTGGCAACCACTTGC-GC-TCAAT--TGAGAATA 2249 | ||| | |||||| || |||||||| | ||||| ||| || | || | | || Sbjct 427 TTGGGCAGTGGCCTTCATTGATGGATGTTGCAAC----TGCAGCATATATTCTAGGCGTA 482 Query 2250 TTCTATCCGGATGTTCACGAT--GCAGAGTTGCCCAGAATTTTGGTTGACCACAACACAC 2307 ||| |||| || | |||| || || || ||||| || | ||||||||| |||| Sbjct 483 TTCCATCCTGA--AACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACAC 540 Query 2308 AGA-CATGTCATGTTGTTGATTCATATGGTTCA 2339 | | |||| ||||| ||||||| ||||| ||| Sbjct 541 AAACCATG-CATGTCATTGATTCTTATGGATCA 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31219068546560