Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020896.1 Length=10081 Score E Sequences producing significant alignments: (Bits) Value seq33068 111 1e-20 >seq33068 Length=655 Score = 111 bits (122), Expect = 1e-20 Identities = 240/356 (67%), Gaps = 10/356 (3%) Strand=Plus/Plus Query 2409 CATTTGGTTATTGGGAATGCAGGGGATCCAAAATATGTCGATCTCCCAAC---TGAGGCG 2465 ||| | ||||| || | | || |||||||| || | ||||| ||| | |||||| Sbjct 240 CATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCA 299 Query 2466 AGTGCAAGATTATATATCGCCAAAGAAGGTTTTTGTTACATAAATATCTTTTTGGCGATG 2525 | | | | ||||| || || ||||||| ||| || | ||||| || | || ||| Sbjct 300 ---GAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATG 356 Query 2526 CTGGTTAATGTGAGGGAATCTGAGGCTAAGGATTTCACGAAGAGAGTGCGTGATATAGTG 2585 || || ||||| | || || || ||||||||||| || | | |||||| | || Sbjct 357 CTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTG 416 Query 2586 GTGCAGAAACTTGGAAAATGGCCAACGATGATAGATGTGGCAACCGCTTGTTGTCTACTA 2645 | | | ||||| | ||||| | |||| ||||| ||||| || | | | ||| Sbjct 417 ATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTA 476 Query 2646 GCTGTATTCCATCCAGAAGTACAAGAT--GCCGAGCTCCCAAGGATTTTGGTTGACCACA 2703 | ||||||||||| ||| || ||| || || | || ||||| | ||||||||| Sbjct 477 GGCGTATTCCATCCTGAA--ACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACG 534 Query 2704 CAACCAAAACAATGCATGTGATCGACTCATATGGATCGAAAAACACTGGGTATCAC 2759 | || |||| |||||||| || || || |||||||| || |||||||||| Sbjct 535 CTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCAC 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32130690937520