Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021196.1 Length=9731 Score E Sequences producing significant alignments: (Bits) Value seq33068 318 4e-83 >seq33068 Length=655 Score = 318 bits (352), Expect = 4e-83 Identities = 441/615 (72%), Gaps = 2/615 (0%) Strand=Plus/Plus Query 1892 TTGGCAATTGGCTCCCTTATTGTACCACTAGATTTTGAGCGCGCTCGGATGGCGTTACAG 1951 ||||| || ||||| | ||||||||||| |||| || | || || | || ||| Sbjct 42 TTGGCCATAGGCTCATTGATTGTACCACTCAATTTGGATAGGGCACGCACTGCACTACTT 101 Query 1952 GGCAAAAGTGTGGCAAGAGAA-CCAATTACTATGGCGTGTATATCAAGACAAGATGGGAA 2010 || | || | | | |||| ||| | || |||||| | || ||| |||| || Sbjct 102 GGAGAGAGCATTGAGA-AGAAGCCACTCACATCAGCGTGTGTCTCCCAACAGAATGGAAA 160 Query 2011 TTTTGTGTACCCATGTTGTTGTGTCACACATGATGACGGGAAAGCATTCTACTCAGAGCT 2070 || | | || ||||||| ||||| || ||||| || | | | ||||| ||||| Sbjct 161 TTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCT 220 Query 2071 TAAAAGCCCCACAAAGCGCCATCTAGTTATTGGAACATCTGGAGATCCAAAGTATATTGA 2130 ||| ||||| || ||| | ||||||||||| ||| | ||||| ||||||||||| ||||| Sbjct 221 TAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGA 280 Query 2131 TTTACCAGCGGCTGAATCAGAACGAATGTATATAGCTAAAGAAGGATTTTGTTATCTTAA 2190 | | ||||| |||| ||||||| ||||||||||| || ||||| | ||| ||||| || Sbjct 281 TCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAA 340 Query 2191 CATCTTTCTGGCAATGTTGGTAAATGTTAATGAGGATGAAGCAAAAGATTTTACGAAAAT 2250 || || || |||||| | ||||||||||||||| | |||||||| ||||| || ||||| Sbjct 341 TATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAAT 400 Query 2251 GGTGAGGGATATAATAGTGCCTAAACTTGGGCAGTGGCCAACAATGTTGGATGTGGCAAC 2310 | | | ||| | | | || | |||||||||||||| || || ||||||| ||||| Sbjct 401 GATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAAC 460 Query 2311 AGCTGTTTACATGTTGACTGTTTTCCATCCCGAAACAAGAAATGCTGAACTGCCGCGCAT 2370 || | || || | || |||||||| ||||| || |||||| | || | || Sbjct 461 TGCAGCATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGAT 520 Query 2371 TTTGGTTGATCATGCGTGTCAAACAATGCATGTCATAGATTCTTTTGGATCTTTAACAGT 2430 | ||||| || || ||||| ||||||||||| ||||||| |||||| |||| || Sbjct 521 CCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGT 580 Query 2431 TGGTTACCACGTCCTTAAAGCTGGTACGGTAAACCAGCTGATTCAATTTGCATCCAGTGA 2490 ||| || ||||| || || || || || || || || | ||||||||||| || | ||| Sbjct 581 TGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGCCTCAAATGA 640 Query 2491 CCTTCAGAGTGAAAT 2505 || || || || || Sbjct 641 TCTGCAAAGCGAGAT 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31011154667920