Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021197.1 Length=9868 Score E Sequences producing significant alignments: (Bits) Value seq33068 111 1e-20 >seq33068 Length=655 Score = 111 bits (122), Expect = 1e-20 Identities = 309/460 (67%), Gaps = 18/460 (4%) Strand=Plus/Plus Query 2234 CATGCTGCTGTGTCACCGATGATAGAGGTGAACCAT--TTTACTCACAGGTTAAACCGCC 2291 |||| |||||||| || |||| || | ||||| | ||||| || |||| || Sbjct 172 CATGTTGCTGTGTAAC-GATGGATGATG-GAACCCCGATGTACTCCGAGCTTAAGAGCCC 229 Query 2292 AACCAAGAGACACATGGTAATTGGAGGAGCTGGGGATGACAAGTATGTGGATATGCCTG- 2350 || ||||| || | || || |||| |||| ||| ||||| | ||| |||| | Sbjct 230 GACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGC 289 Query 2351 ACCTAGGTGATATACATATGTATATTGTTAAGGATGGTTATTGTTATCTGAATGTATTCT 2410 | || | | | || ||||||||| | ||||| |||||||| ||||| ||| | ||| Sbjct 290 ATCTGAGGCAGA-ACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCC 348 Query 2411 TGGCTATGTTAATAAATGTTAATGAGTCCGAGGCGAGGGAATTTGTTAAGATGGTGAAGA 2470 | || ||| | |||||||||||||| ||| || | ||| || || ||| | Sbjct 349 TCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTG 408 Query 2471 ATGTGGTTATTCCGAAGCTAGGTAAATGGCCAAAGTTGACGGACCTTGCAG-TGATGTGT 2529 |||| | || || | ||| || | ||||| |||| ||| ||||| || | | Sbjct 409 ATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCAT 468 Query 2530 -TACGCGATCTCAGCTGCATTCC---CTGAAACAAAAACAGCTGAGTTACCTCGGATTTT 2585 || ||| || | ||||| ||||||| | ||||| ||||| |||| | Sbjct 469 ATAT----TCTAGGC-GTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCT 523 Query 2586 AGTTGACCACAAAA-ACAAGATGATGCATGTTATTGACTCATATGGGTCACTAACTGTTG 2644 ||||||||| | |||| | |||||||| ||||| || ||||| ||||||||||||| Sbjct 524 TGTTGACCACGCTACACAA-ACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTG 582 Query 2645 GGTACCACATCTTGAAAGCTGCTACTGTAACCCATTTAAT 2684 |||| ||| | | || || | ||||| | |||||||| Sbjct 583 GGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAAT 622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31449373150592